KEGG   Syngnathus scovelli (Gulf pipefish): 125977588
Entry
125977588         CDS       T08785                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X1
  KO
K12169  Kip1 ubiquitination-promoting complex protein 1 [EC:2.3.2.27]
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sscv04121]
    125977588
Enzymes [BR:sscv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     125977588
Ubiquitin system [BR:sscv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    125977588
  Multi subunit type E3
   KPC complex
    125977588
SSDB
Motif
Pfam: SPRY zf-C3HC4_3 zf-RING_2 zf-C3HC4
Other DBs
NCBI-GeneID: 125977588
NCBI-ProteinID: XP_049590267
LinkDB
Position
11:13769215..13785663
AA seq 1325 aa
MALSHRDYRLASDTDKAKSAGIVNERLLSDYLHHVFPFADEAAVLPSLRKPLTFQDLDTH
LQTLLCEGDTADNSASDRELEGRLGPQPVVLDHTGGFEGLLFVDDDLLGVIGHSNFSSIR
ATTCVYKGKWAYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVRKWNVVT
TNYGKSWAAGDIVSCLIDLDDASIAFCLNGQSLGTAFADIKTGPGVAYFPAISLSFKESV
AFNFGSRPLRYPCEGYLPLQDPPAADLLKAHKLLGFVKNVLCTHIHVQEERMAEADCSVW
RLNGEATVLITMAHIFKYFAPLMCQVYLVEDVLMNFLLGILEGGGSVDEHPLIQQLLDLF
WLLMEDYEVNECLKQLMMSLLRAYRFSPIIPDLGFQIHYLRLTTAILRHEKSRKYLLNNV
LFDVLRSVVFFYIKTPLRVKEAGLDELIPTTWWPTHFDKEGKDERQPKDESSDERLRRRA
YERGCQRLKKRIEVVEELQVQILRLLLNNKDKRTGKASRYIFLNKFRRFLQENASNRGHP
TALCPPEYMLCFLHRLITAVRACWDESCKKISGSVTSDAAFVPPQLFYNGKVDYFDLQRL
GGLLSHLKKTLRDDLAAQANVIIDPAEIQAASMGDLDEDEESGAAQRPAGSTPARPGWLG
SPTLGRTNRFLGAAAVGLVTPRRPLGQPDKVKVRALAMERRTEEDIEGSHGGDDGLLLGR
PVGWLQQPVADKSLLELTDGIVMMYNLSVHQQLGKMVAVADDVREYAVALKDTDEKMARC
PPGRPDILEELGKSQKVFAEKLNHLSRRLAWINATTYSKEKMLDVYWLLRVCMGTIEHAD
RTGSLFAFVPEFYLHVAMYAYNALKNYFAPAGGMEQLPGYEETLTQLAAILAKHFADPRI
VGTDIKDALMQALASYVCYPQSLRAVERIPEDQRVAMMRNLLAPYEQRPWAQTNWILVRL
WRGCGFGYRYTRLPHLLKTKPEDANLPSLQRDLTIACSHQPCPSLLLQRHMARLLSTDKD
MAASFLNSVLNQLNWAFSEFIGMIQEIQQAAERPERNFVDTRQLKVCATCFDLSVSLLRV
LEMTVTLVPEIFLDWSRPSAELLLRRLAQLLNQVLNRVTAEKNLFDRVVNLRLPGLESVD
HYPILVAVTGILVRLLVDGDRHRTCRAACVLLSDPCFQLHSIRHLLSEAGDQASLKTAPA
LASSFSVPVPSVAPPPLAGPSELKHFSLNAYSDYVSEDEKLKVESMLAFLTRESQKAATS
MQPASEDDLCPICYAHSISAIFQPCSHKSCKACINQHLMNNKDCFFCKATITAVDDYCKP
PASSS
NT seq 3978 nt   +upstreamnt  +downstreamnt
atggcgctgagccaccgcgactacaggctggcctcggacacagacaaagccaagtctgct
ggtatcgtcaacgagaggctgctgagcgactatttgcatcacgtcttcccttttgccgat
gaggccgctgttctgccctccctcaggaagcctttgaccttccaggatttggacactcat
ctgcaaacgttgttgtgcgaaggcgacacggctgacaacagcgcctcggaccgtgagctg
gaaggtcgtctgggtccccagccggtggtcctggatcacaccggtggcttcgagggcctc
ctctttgtggacgacgacctgctgggggtgatcggccacagcaacttcagctccatccgg
gccaccacctgcgtgtacaaaggcaagtgggcgtacgaggtgctgatctcttcgcagggt
ctgatgcaaatcggctggtgcacgctcaactgccgcttcaaccaggaggagggtgttggc
gacacgcccgactcatacgcctacgacgggaatcgagtgcgcaagtggaacgtggtcacc
accaactacggcaagtcgtgggcggcgggggacattgtcagctgtctgatagacctggac
gatgccagcatcgccttctgcctgaacggccagtcgctgggtacggcgttcgccgacatc
aagacgggccccggtgtggcctacttcccggccatcagcctgtccttcaaggagtctgtg
gccttcaactttggcagccggccgctcaggtacccgtgcgaaggctacctgcccttgcag
gacccgccggctgccgatctgctcaaggctcacaagctgctgggcttcgtcaagaatgtc
ctgtgcacgcacatccacgtgcaggaggagcggatggccgaggcggattgctccgtgtgg
aggctcaacggcgaggcaacggtcctgatcacaatggcgcacatcttcaagtactttgct
ccactgatgtgccaagtctacctggtggaggacgtgctgatgaacttcttgctgggaatc
ctggagggcggcggttccgtggacgagcatccactcatccaacagctcctcgacctcttc
tggctcctcatggaggactatgaggtgaacgagtgtctgaagcagctgatgatgtcgctg
ctgagggcctaccgcttctcccccatcatccccgacctcggtttccagatccactacctt
cgtttgacgacggccatcctgcgtcacgagaagtctaggaagtacctgctcaacaacgtc
ttgtttgacgtgctgcgctcggtggtgttcttttacatcaagactccgctgcgggtgaag
gaggcagggctagatgagctgatccccaccacctggtggcccacgcactttgacaaagag
ggaaaggatgagcgccagcccaaagacgagagttctgatgagcgtctgcggaggcgagct
tacgagcgagggtgtcagcggctgaaaaaaagaatcgaagtggtggaagagctgcaagtg
cagatcctccggctgctactcaacaacaaagacaagcgcacgggcaaagcctcgcgttac
attttcctcaacaagttccgcaggttcctgcaagagaacgccagcaacagagggcatccc
acagccctgtgcccgcccgagtacatgctgtgcttcttgcaccgcctgatcacggccgtg
cgcgcctgctgggatgaaagctgcaagaagatttcgggcagtgtcaccagtgatgcagcg
tttgtgccgccgcagctcttctacaatggcaaggtggactactttgacctgcagcggctg
ggtgggctgctgtcgcatctcaagaagacgctcagagacgacctggccgctcaggccaac
gtcatcatcgaccccgccgagatccaagcggcgtccatgggtgacttggatgaggatgag
gagagcggcgctgcgcagaggccagcgggcagcaccccggctcggcccggctggctgggc
tcgcccaccctgggccgcaccaaccgcttcctcggtgccgctgccgtcggcctcgtgacc
cccaggcgaccccttggccagcctgacaaggtcaaagtgcgggccctcgccatggagcgg
cgcaccgaggaggacattgaagggagccacggcggcgatgacggcctgctgctgggccga
cctgtgggctggctgcaacagccagtagccgacaaatcacttctggagctcaccgacggg
attgtcatgatgtacaacctcagcgtgcatcagcaactggggaagatggtggcagtagcc
gacgacgtgcgcgagtacgcggtggccctcaaggacacggacgagaagatggcccgatgt
ccgcccggaaggccagacatcttggaggaactcggcaagagtcagaaggtctttgcggag
aagttgaatcacctcagcaggaggctggcctggatcaacgccaccacatactccaaggag
aagatgttggatgtgtactggctgctgcgcgtgtgcatgggcaccattgagcacgccgac
cgtacgggctcgctcttcgcctttgtccccgagttctacctccacgtggccatgtacgcc
tacaacgcgctcaagaactactttgctcccgccggcggcatggagcagctgccgggctac
gaagaaacactgacccagctggcggccattctcgccaaacactttgcggatccgcgcatc
gtcggaacagacatcaaagacgcactaatgcaggcgctggccagctacgtctgctacccg
cagtccctcagggcagtggagaggatccccgaggaccaacgcgtggccatgatgaggaac
ctgctggccccctatgagcagagaccctgggcgcagaccaactggatcctggtccggctg
tggcggggctgcggttttggctacaggtacacgcgcctgccgcacctcctcaagaccaaa
cccgaggacgccaacctccccagcctccagagggatttgaccattgcgtgttcacaccag
ccatgtccgtcgctgctgcttcagagacacatggcccggctgctgagcaccgacaaagac
atggctgcctccttcctcaacagcgtcctcaatcagctcaactgggccttctccgagttc
atcggcatgattcaggagatacagcaggcagccgagcgtcctgagaggaactttgtggac
acgcgtcagctgaaggtatgcgccacctgctttgacctgtccgtcagcctgctgagggta
ctggagatgacggtcacgctggtcccggagatcttcctggactggtcgcgtccgtccgcc
gagctgttgctgcgccgcctggctcagttgctgaatcaggtgttgaatcgggtgacagcc
gagaagaacctctttgaccgcgtggtcaacttgcgactgccaggtctggagagtgtggac
cactaccccatcctggtggccgtcactggcatccttgttcgacttcttgtggatggcgac
cggcacaggacgtgtcgcgcggcctgcgtgctgctgtcggacccgtgcttccagcttcac
tccatccgtcaccttctcagcgaggccggcgaccaggcgagcctgaagacggcacccgcg
ctagcctcttccttctccgtcccggtgccctcagtcgctccaccccctctcgccggcccc
tcggagctcaagcatttctccctcaatgcttacagcgactacgtcagcgaggacgagaag
ctgaaggtggaaagcatgctggccttcctcaccagggaatcgcagaaggcagcgaccagc
atgcagcctgccagcgaggatgacctttgccccatctgctacgcgcactccatttcggcc
atctttcagccctgctcgcacaagtcctgcaaggcctgcatcaatcagcatctgatgaac
aacaaggattgtttcttctgtaaggccaccatcacggcagtggacgactactgcaagccc
cccgcctccagctcgtag

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