Syngnathus scovelli (Gulf pipefish): 125977630
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Entry
125977630 CDS
T08785
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125977630 (pkp1b)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
125977630 (pkp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Atx10homo_assoc
Nipped-B_C
Motif
Other DBs
NCBI-GeneID:
125977630
NCBI-ProteinID:
XP_049590363
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All DBs
Position
11:1277856..1282790
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AA seq
688 aa
AA seq
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MAGAHPLKSALSISPVDDTSLALPSGHQQYRSGEQRVLEQVQSVQRTRSRHSSSSRTGST
SLSPTSPFNDEMFESSMSKGNVFFGNGQLKTLPVDKSLNRHSFNNTISGAAKTSNTFHRR
YEFGSASVGRMAHNRDEPDQNRQRSLHTHMEPPHWVLSNRKSYRTEMRSGGGGGQFIGTN
QKFRTKVPGKGDSGSSGNSAMADITMKEAVEFLSNEDIKYQLCGASYIQHNTFVDDKAKE
EVRKYKGIPPLVALLNSSNPDLSQTASASLRNLAFKNNDNKEEIQHCGGVASAVALLRET
DSTEIQRQLTGLLWNLSSANSLKTDLLKSTLPVLMESVILPYTTSPERGTSSGPDQESFF
HATSCLRNLSSAKQSNRQTMRKCRGLVDSLVAYLQGCVDAGRTDDKCVENCACILHNLTF
DLEAEAPALFNRITALAKPVGPVDSQGDAGPITCFSSPTKSSDNKHYFDFPVVEDPNPTG
AGWLIHSKTLQNYLTLLGSSHRDETQEACCGALLNLTAQEGIVSNVMSQTVVQKLDGLQV
ITPLLKSDKVTLQRNAVALMRNFSKNPNLQGILARKVLPDLLAILGAGTKEGNESDDTLA
LACQTANFLVAKEPESAKRLLNGGLINSLKELSENRYFPKSSKSASVFLYQLWSDKDIQN
LLKRQGMNKSSFVNDVTTAARKSVQVID
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgcccatccgctgaaatcggccctgtccatcagccccgtggacgacacttct
ctggccttgccctcggggcaccaacagtatcgttccggagagcagcgcgtcctggagcag
gtgcagagcgtgcagaggaccaggtccaggcactccagcagcagcaggactggctcaacc
tctttgtctccgaccagccctttcaatgatgaaatgttcgagtccagcatgtcgaaggga
aatgtcttctttgggaatggtcaactaaaaactctccctgttgataaaagcctcaaccgc
cactcattcaacaacacaattagcggcgctgccaagaccagcaacacctttcaccgtcgc
tacgagttcggctccgcttccgtgggccggatggcccacaaccgcgacgagcctgaccag
aaccggcagcgctccctacacacacacatggagcctccgcattgggtcctctccaaccgc
aaaagctacagaacggagatgcgcagcggcggcggcggcgggcagttcattggcaccaat
cagaaattccggaccaaggttcctggcaaaggggattctgggtcaagcggaaacagtgca
atggctgatatcaccatgaaggaggctgtggaattcctgtccaacgaggacatcaaatac
caactctgcggagcctcttacatccagcacaacacttttgttgatgacaaagctaaggaa
gaggtgcggaagtataaggggatccctccgctggtggcgctgctgaacagctccaaccca
gatctgagccagacggcctcggcctccctgcgcaacctggccttcaagaacaacgacaac
aaggaggagatccaacactgtggcggcgtcgcgtctgctgtggctctgctccgtgaaact
gactccactgagattcagaggcagctcaccggtcttctatggaatctgtcgtctgctaac
agcctgaagacggacctcctcaagagcacgcttcctgtcctaatggagagcgtcatcctg
ccttacaccaccagcccagagcggggcacgtccagcgggcctgatcaggaatccttcttt
cacgccaccagctgcctgcgaaacctcagcagtgcaaagcagagcaaccgacagaccatg
aggaaatgccgaggtttggtggactccctggtcgcttaccttcaaggctgcgtggatgct
ggcaggacggatgataagtgcgtggagaactgcgcatgcatcctgcacaacctcaccttt
gacctggaggccgaggcgccggccttgttcaatcgcatcacggcgctggcgaagcccgtt
ggccccgtagacagtcaaggtgacgccgggcccatcacctgcttcagttcgcccaccaaa
agctcagacaacaaacactactttgatttcccagtggtagaggaccccaacccgactggg
gccggctggctcatccactccaaaaccctgcagaactacttgaccttattgggctcaagt
catcgggatgaaactcaggaggcctgttgtggagctctgctgaacctcacagcccaggaa
ggcatcgtttccaacgtcatgagccagacggtggtgcaaaaactggatggcctgcaagta
atcaccccgcttttaaagtcagacaaagtcaccctgcagaggaacgctgtggccttgatg
cggaactttagcaagaaccccaacctgcaaggcatcttggctcgcaaagtgttgcctgac
ctcctggccatcctgggagctggcaccaaggagggcaacgagtctgacgacacgctggcc
ttggcgtgccagactgccaacttcctggtggccaaggagcccgagagcgccaagcgcctg
ctaaatggtggcttgatcaactcactgaaggagctcagcgagaacagatattttcccaaa
tccagcaagtcggcatcagtgtttctctaccagctatggtctgacaaggacatccagaac
ctcctaaagaggcaagggatgaataagtcatccttcgtcaatgacgtcaccacggcggcc
cgcaagtcggtacaagtgatcgactag
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