KEGG   Syngnathus scovelli (Gulf pipefish): 125978120
Entry
125978120         CDS       T08785                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 3-like isoform X1
  KO
K07968  beta-1,4-galactosyltransferase 3 [EC:2.4.1.90 2.4.1.38 2.4.1.-]
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00510  N-Glycan biosynthesis
sscv00513  Various types of N-glycan biosynthesis
sscv00514  Other types of O-glycan biosynthesis
sscv00515  Mannose type O-glycan biosynthesis
sscv00533  Glycosaminoglycan biosynthesis - keratan sulfate
sscv00601  Glycosphingolipid biosynthesis - lacto and neolacto series
sscv01100  Metabolic pathways
Module
sscv_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
sscv_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    125978120
   00513 Various types of N-glycan biosynthesis
    125978120
   00515 Mannose type O-glycan biosynthesis
    125978120
   00514 Other types of O-glycan biosynthesis
    125978120
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    125978120
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    125978120
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:sscv01003]
    125978120
Enzymes [BR:sscv01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     125978120
    2.4.1.90  N-acetyllactosamine synthase
     125978120
Glycosyltransferases [BR:sscv01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   125978120
  Glycolipid
   125978120
SSDB
Motif
Pfam: Glyco_transf_7C Glyco_transf_7N CHGN
Other DBs
NCBI-GeneID: 125978120
NCBI-ProteinID: XP_049591146
LinkDB
Position
12:complement(12412543..12418192)
AA seq 376 aa
MDCYRRLGKWPSGLASLVGLTAAVTLVLRCAFWAAPRPLAGCRAESSLLGERHIKTPPAV
GRLVCHRLLCPEQLGQGPSISPRRLPLWKRLERGARRCCRVDSTAPRTAKLSTVSPLWCR
IGSERCTSALSCATCTLSCRGSRSTTGSTSWSSKDSNRQTFRRGAKTAVIWAVFQWGDGT
FNKGKLLNAGVREVLRDEDWSCIVIHDVDLLAENDRNLYTCDKCNPTHLAVAIDKFHYRL
PYRQYFGGVVAVTPDQYRKMNGFSNQYWGWGREDDDLWQRVALAGMKVMRPPLAIARYKM
IKHHRDRGNEENPYNFVLRNRTALAWYVDGLNSLTYKLLSKEQEPLYTRLAINVGEKPRP
WVQDETTTDKTATSRD
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggattgctaccgacgcctcgggaagtggccgagtggtttggcctcgctggtgggcttg
acggccgccgtgaccttggtgctgcgctgtgccttctgggcggcgcctcgtccgctagct
ggctgccgtgcagagtcgtcgctgttgggtgagaggcacatcaaaaccccacctgctgtt
ggaaggctcgtgtgccaccgtttgctctgccctgagcagttgggccaaggcccgtcaatc
tcacctcgtcgcctcccactttggaagagattggaaagaggagcgcgtcggtgctgccgg
gtggactctaccgccccccggactgcgaagctcagcaccgtgtcgccgttgtggtgccgt
atcggaagcgagcgatgcacctccgcactctcctgtgccacctgcaccctttcctgcaga
ggcagcagatccactacaggatctacatcgtggagcagcaaggactccaatcgccagact
ttcaggaggggtgcgaagacagctgtgatttgggctgtctttcagtggggtgacggcacc
ttcaacaaaggcaaactgctcaacgctggcgtccgggaagttctccgagatgaagactgg
agctgcatcgtcatccacgatgtggacctgttggccgagaacgaccgcaatctgtacacc
tgcgacaagtgcaatcccacacacctggccgtggccatcgacaagtttcattacaggctt
ccttaccggcagtattttggtggcgttgtcgcagtgactccagaccagtacaggaagatg
aacggcttctccaaccagtattggggctgggggagagaggatgacgatttgtggcaaaga
gtggctctggcgggcatgaaggtgatgcgccccccactggccattgctcgttacaaaatg
atcaagcatcacagagacagagggaatgaggaaaacccgtataactttgtactgcggaat
agaaccgcgctggcctggtacgtggacggcctcaactctctgacatacaaactcctctcc
aaagagcaggaacctctctacactcgcctcgccatcaacgtcggagaaaagccccgcccc
tgggttcaggatgaaacgacaacagacaaaacagccacttcacgtgattga

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