Syngnathus scovelli (Gulf pipefish): 125978272
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Entry
125978272 CDS
T08785
Symbol
xiap
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04120
Ubiquitin mediated proteolysis
sscv04210
Apoptosis
sscv04217
Necroptosis
sscv04510
Focal adhesion
sscv04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125978272 (xiap)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125978272 (xiap)
04217 Necroptosis
125978272 (xiap)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125978272 (xiap)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125978272 (xiap)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125978272 (xiap)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125978272 (xiap)
03029 Mitochondrial biogenesis [BR:
sscv03029
]
125978272 (xiap)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125978272 (xiap)
Peptidases and inhibitors [BR:
sscv01002
]
Peptidase inhibitors
Family I32: IAP family
125978272 (xiap)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125978272 (xiap)
Mitochondrial biogenesis [BR:
sscv03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125978272 (xiap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
125978272
NCBI-ProteinID:
XP_049591412
LinkDB
All DBs
Position
1:17256481..17263611
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AA seq
403 aa
AA seq
DB search
MSDLGEDGVLETDFMVDYSQMSDRLHSFNGSTLAEQVPAERLARAGFYYTGPADRVRCFS
CRMNVENWCRGDIPVERHKEVSPLCKFLSCTHRTNFQHSTQLTGSRYNEDDEDMEYRLRT
GEVVDESTYPMVPHMRREEARRQTFSTWPATAPVTPSDLAQAGLYYLGQGDRVQCFCCGG
MLGGWEAGDTAWGEHGKHFPTCFFILGHDVGNVPSEGGTGQENPCSAPQVNTYSSMGSFQ
ERLRSFAGIQHPIDHVRLARAGFYSTGERDMVMCFHCGGGLKGWEPDEDPWEEHAKNYPG
CSFLLAEKGQEFINTIQLQGPQRNKDTSSHQNGFTAYKNDDDPLETLRKLQREKLCKVCM
DRDTCVVFIPCGHLATCEECSQTLIKCPICCGAITQKVKTYIA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacctcggagaagatggtgtactcgagaccgatttcatggtcgactactcccaa
atgagcgaccgtctccactcattcaatggctccactctggcagagcaggtgcccgcagag
cgactggcccgggctggattctactacactggtcctgccgatcgggttcgctgtttcagc
tgcaggatgaatgtggaaaactggtgccggggagacatacccgtagagaggcataaggag
gtttccccattgtgcaagtttctcagctgcacccatcgcaccaatttccagcacagtaca
cagctaacgggctccagatacaacgaagacgacgaagacatggaatatcgtttgagaaca
ggggaggtggttgatgagtccacctacccaatggtccctcatatgaggagggaagaggcc
agacgtcagactttttccacttggccagccactgctcctgtgacacccagcgatctggcg
caagctggcctttactacctgggccaaggtgaccgggttcagtgtttttgctgcggtggc
atgcttggtggctgggaagctggagacacggcctggggtgaacacggcaaacattttccc
acctgcttcttcatcctcggccatgacgtgggaaacgtcccatccgaggggggcacggga
caggagaatccttgcagtgcacctcaagtcaacacttacagctctatggggagtttccaa
gagaggctgcgcagctttgcagggattcagcacccaatagatcatgttcgactagcaagg
gctggcttctacagcacaggggaaagagacatggtgatgtgttttcattgtggtggcgga
ttaaaaggctgggagcctgatgaagacccatgggaagagcatgccaaaaattatcctgga
tgcagtttcttgttagcagagaaaggacaagaatttatcaacaccatccagctgcaaggt
cctcaacgaaacaaagatacctcaagtcatcagaatggatttacagcatacaaaaatgat
gatgacccattggaaacactacggaaactgcagagggaaaaactgtgcaaagtgtgtatg
gatcgagatacttgtgtcgttttcattccgtgcggtcatctggccacttgtgaggaatgt
tcacagactcttattaagtgtccaatttgttgcggagccattacgcaaaaggtaaaaact
tacatcgcttaa
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