Syngnathus scovelli (Gulf pipefish): 125978423
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Entry
125978423 CDS
T08785
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125978423 (ret)
04020 Calcium signaling pathway
125978423 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sscv01001
]
125978423 (ret)
Enzymes [BR:
sscv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125978423 (ret)
Protein kinases [BR:
sscv01001
]
Receptor tyrosine kinases (RTK)
RET family
125978423 (ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD1
RET_CLD4
RET_CRD
Cadherin
Pkinase_fungal
RIO1
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
125978423
NCBI-ProteinID:
XP_049591726
LinkDB
All DBs
Position
12:complement(4988926..5002392)
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AA seq
1112 aa
AA seq
DB search
MGSSCGLSRGNGASLLLLLLWMLLRGAKGLYFPQNEYKETIYVGQAAGSQVLQVHAMLDS
ESEKPHFYLCWSNPLKRPVYSSWFNMDTNTGVLSLNKTLDENDFAMLYKPSWSVKKLSLS
VMVLPKFTKRSWCITRNNPRIILDFVNATMPQCAQTDMKELCYPHRDISKPHIMENRFPG
PVMQLRRLTRLNVCPNFTISYTVESETPAPFAVNQNTSEMVVTAPLDREESERYRLLLVC
TVISEAAITTLDTPLDVFVNDEDDNAPYVNLTDTADIVISFNRTKGGTYGTLSVFDRDLT
SIYSTDQSHNRYVETLLNTDPWTRETFDVKRSFSEKKAAHNGVRETIHNYDLILKRNLLV
TENRSVQLDYLVNDTTYPGLEGTVSLHFNVTILPVHIRFENFTHIFTPTRRASIYAQVGR
VCVENCQQFDGFSVTYQLKVPDKNISADELSCYAAISIAQAPDEMWGLLYVNDSESLRRA
ECQDLQYIVVAQAANAQGEVSAEIRIILDAEVVNQDSQQLVSCAENRRRGDCESTRGLGA
TTGRCQWRQGTEKGIAENYSTCSPDLRTCPDSFCDAIESKDTSICPQDCTKETVTGGHEL
GLRNGIQAGYGTCYCLTERCFCEKDDIEEGLCDDMCKTVIATILLLSFIVSILLSSYFIH
RYHKKSPKAPIASAEMTFRRPAQAYPISFPANNLRRGSQESIETDTFKIPEDPKWEFPRK
NLVLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHSELRDLLSEFTLLKQV
NHPHVIKMYGACSQDGPLYLIVEYAKFGSLRNFLRESRKVGPSFMGMDANRNSSYLENPD
DRALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEE
DSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN
LLKTGYRMERPENCSEEMYNLMGRCWKQESDKRPTFSDISKELEKMMVKSRDYLDLAAST
PADALLYDDALSEEDTPLVDCNNAPIPRTLPSTWIENKLYGMSYPNWPEKSPVPLNRHDA
TNPVFTRYANDSVYANWMALPSPAKTVDKLDS
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaagttgtggtttgtcacggggaaacggcgcgtcgctgctgctgctgttgctg
tggatgctgctgagaggggctaaaggattgtacttccctcagaatgagtacaaggagacc
atttatgttggccaggcagcaggaagccaggtcctccaagtccacgccatgctggacagc
gagtccgagaagccgcacttctacctgtgctggtccaacccgctcaagcggcccgtctac
agctcctggtttaacatggatacaaacaccggagtgctgtccttgaacaaaaccctggat
gagaatgactttgccatgctatataaaccttcgtggtctgtgaagaagctgtctctgtct
gttatggtgctacccaagttcaccaagaggtcctggtgcatcacgagaaataaccctcgg
atcatcctggactttgtaaatgccaccatgccacaatgtgcacagactgatatgaaagag
ttatgctacccgcaccgagacatctccaaaccacacatcatggagaacagattccccggg
cccgtgatgcagctgcgacgactcaccagactcaacgtgtgccccaactttaccatctct
tacactgtggaatcagagacacctgctcccttcgccgtgaatcagaacacctccgagatg
gtcgtgacggctcctttagaccgagaagagagtgaacgttacagactcctgctggtttgc
acagttatttccgaggccgccatcaccaccctggacactcctctggatgtttttgtcaac
gacgaggacgataacgcgccatatgtgaacttaaccgacacggcagatatcgtcattagt
ttcaatcggactaaaggtggcacttacggcacattgtcagtttttgacagggacttgacc
tccatctattctacagaccagagtcacaataggtatgttgagaccttgctcaacacggac
ccatggacgagagaaacatttgatgtaaaacgcagcttcagtgaaaagaaagcagctcat
aatggagtcagagaaaccattcataactacgacctgatcctgaagaggaacctgcttgtg
acggagaatcgcagtgtgcagctggactacctggtcaacgacaccacctaccctggtctg
gagggaactgtgtcacttcacttcaacgtcaccatcttaccggtccacatccgctttgag
aacttcacgcatatcttcacgcccacccggagagcttccatttatgctcaggttggcaga
gtctgcgtggaaaactgccagcagtttgatggcttcagtgtcacataccagctcaaggtt
cccgataagaacatctctgctgacgaactgtcttgctatgcggccataagtatcgcccag
gcgcctgacgaaatgtggggactcctctacgtcaacgactcggagtctctacgaagagcc
gagtgccaggatctgcagtacatcgttgtagctcaggcggcgaacgcacaaggggaagtc
agcgctgagatccgaatcattctggatgctgaagtcgtgaaccaggacagtcagcagctc
gtgtcctgcgcagaaaacagacgtcgaggagactgtgagtccaccagaggtctgggggcg
acgacggggagatgccagtggaggcaaggcactgaaaaaggaattgctgaaaactactcg
acctgctccccagacctgcggacatgtccagatagcttttgtgacgctatcgaaagcaaa
gatacatcaatatgcccgcaagactgtacgaaggaaactgtcacaggaggtcatgaactt
ggtctaagaaatggcatccaggctggctacgggacatgttactgcttgacggaaagatgc
ttctgcgaaaaagacgatattgaggaggggctctgcgacgacatgtgcaagacggtcatc
gccaccattctgctcctctccttcatcgtttccatcctcctttcatcctacttcatccac
cgctaccacaagaagtcacccaaggccccaatcgcgtccgctgagatgactttccgccgg
ccggcccaggcttaccccatcagcttccccgcgaacaacctacgaagaggctcgcaggaa
tccatcgagaccgacacctttaaaatacctgaggatcccaaatgggaattccctcggaag
aacctcgtgctcggcaagactttaggagagggagagtttgggaaagtcgtcaaagcgacg
gcattcaggttgaaaggaaaagcaggttacactaccgtggctgtgaaaatgctgaaagaa
aacgcctcccatagtgagctccgggacctgttgtcggaattcactttactcaagcaagtg
aaccaccctcacgtcattaagatgtacggagcgtgcagtcaagatggtccattatacctg
atcgtggaatatgccaagtttgggtcacttcgcaacttccttcgcgagagccggaaagtt
ggcccgagtttcatgggaatggacgccaaccgaaactccagctatttggagaacccagac
gacagggcgctgaccatgggtgacctgatctcctttgcatggcagatatccagaggcatg
cagtatttagctgaaatgaagcttgttcacagggacctcgcagcacgaaatgtgctcgta
gcagagggaaggaagatgaaaatctcagactttggcctctccagagatgtttatgaggag
gactcttatgttaagagaagcaagggtcggatacctgttaaatggatggcgatcgagtcc
ctgtttgatcacatttacacgacccaaagtgacgtctggtcctttggtgtgctcttatgg
gaaattgtgacattaggaggtaatccatacccgggcatagcacccgagcgcctctttaac
ctgttgaagactggatacaggatggagagaccggagaactgctccgaagaaatgtataac
ctcatgggccgatgctggaaacaagaatcggacaagaggccaacgttctctgacatcagc
aaagaactggaaaagatgatggttaaaagtcgggattatctggacttggcagcgtccacg
cctgctgacgccctgctgtacgatgacgcgctctctgaagaggacacaccacttgtggac
tgtaataacgcccctatccctcgaaccctcccctccacatggattgaaaacaagctctat
ggcatgtcatacccgaactggcccgagaagagcccggtaccgctcaacagacatgatgcc
actaatccagtctttacaagatatgccaatgatagtgtttatgcaaactggatggctttg
ccttcacccgcaaaaaccgtggacaagcttgatagctag
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