Syngnathus scovelli (Gulf pipefish): 125978629 Help Entry 125978629         CDS       T08785                                  Symbol slit1a Name (RefSeq) slit homolog 1a isoform X1   KO K06838   slit 1 Organism sscv  Syngnathus scovelli (Gulf pipefish) Brite KEGG Orthology (KO) [BR:sscv00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sscv00536]     125978629 (slit1a) Glycosaminoglycan binding proteins [BR:sscv00536]  Heparan sulfate / Heparin   Axon guidance molecules    125978629 (slit1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_8 LRR_4 LRR_5 EGF Laminin_G_2 Laminin_G_1 LRRNT LRRCT LRR_9 LRR_1 EGF_TEN LRR_14 hEGF LRR_EndoS EGF_Teneurin EGF_DL_JAG JAG1-like_EGF2 EGF_3 LRR_NXF1-5 Motif Other DBs NCBI-GeneID:  125978629 NCBI-ProteinID:  XP_049592116 LinkDB All DBs Position 12:complement(6583851..6651894) Genome browser AA seq 1546 aa AA seqDB search MVLTMPGKRMYFGPLELCAWGVMLCALLPASAGACPALCTCSGTTVDCHGLGLRTMPRNI PRNTERLELNGNNLTRITKTDLAGLKYIRVLQLMENQITAIERGAFDDMKELERLRLNRN QVQQLPELLFQKNPGLSRLDLSENLIQSIPRKAFRGATDIKNLQLDKNHIGCIEDGAFRA LRSLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLAWLAQWLRQRPTIGLF TQCTAPPELKGLNVAEVQKHEFSCSGYQDSSSPQPCNTGGGSCPAMCTCSNNIVDCRGKG LTDIPANLPDSMAEIRLEQNGIKTVPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSL NSLVLYGNKITDLPKGVFDGLYALQLLLLNANKIHCIRANTFQDLQNLSLLSLYDNKIQI LAKGTFASLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPRRLANKRIGQ IKSKKFRCSAKEQYFIPGAEDARLNNACNSDPVCPPKCRCESNVVDCSNLKLTKIPEHIP SSTTELRLNNNDITTLEATGVFKSLTQLKKINLSNNKITEIEDDAFEGASSVNELHLTAN QIDTVRSEMFRGLEGLRMLMLRNNKISCIHNDSFTGLHNVRLLSLYDNQLTTITPGAFDT LQTLSTLNLLANSFNCDCRLSWLGDWLRSKKIVTGNPRCQRPAFLKEIPLQDVALPDFRC EEGHEDSSCVPRPQCPSECTCLETVVRCSNKHLRTLPKGIPRNVTELYLDGNQFSVLPKE LSSFKFLQLVDLSNNKISSLTNSSFANMSQLTTLILSYNALRCIPKMAFSGLHSLRLLSL HGNEISELPDGIFSDVSSLSHLAIGANPLYCDCRLRWLSDWVKTGYKEPGIARCAGPRGL EGKLLLTTPAKKFECTGEVDTTVLAKCNPCLSSPCQNQGVCHSDPVDIYRCNCAPGFKGK NCETALNACVNNPCANGGRCQVDEEDEGQYSCTCPLGFEGPTCQTNVDDCEDNDCENGAT CMDGVNNYTCFCPPYYTGEMCEEMEDVCAPGRSPCQHQSTCLITSSGPKCVCAPGYVGDD CSVDYDDCQEHRCQNGAQCVDELNGYTCQCEDGYSGQLCEVPPSPLSMCELADCQNDAPC VERGGRALCQCPPEFGGPRCEKLVSVNFVDRDSYLLLSDLKNWPQANITLQVSTAEDNGI LLYNGDNDHIAVELYQGHVKVSYDPGSQPGHAIYSAETINDGQFHTVELVTLDQMVNLSI DGGLPTTMDSFGAVRPLNGEAPLYVGGRGPLQNTPSSSSGMPVGVHPGAFRLWQIQNSSS FHGCIQNLYINNELQDFTKTQMKPGVVPGCEPCRKIYCVHGICQPDGLQGPVCHCRPGWV GPQCDLPAANPCQGSKCVHGRCIPLDSESYRCECSEGYRGALCNQQGELFNPCRRLNCKH GRCQISDTGDAYCHCENGYTGDLCDAESACQGEPMRDFYQVQRGYAICQTTRTVSWVECS GMCEAGACCGSQRMKRRKYTFECSDGSTFSEEVEKSIKCGCVGCAV NT seq 4641 nt NT seq  +upstreamnt  +downstreamnt atggtgttgactatgccaggcaaaaggatgtattttggcccgctggagctgtgcgcgtgg ggcgtgatgctgtgcgccttgctgccggccagcgcgggcgcctgccctgccctgtgtacc tgcagcggcaccacagtcgactgccacggactggggctcaggaccatgcccaggaatatc ccacgtaacaccgagaggcttgagctgaatggaaacaatctcacacgcatcaccaagact gaccttgccgggctcaaatacatccgagttctgcaactgatggagaatcagattaccgcc atcgagcgtggggcttttgatgacatgaaagagctcgagagactgcgcctgaaccgtaat caagtgcaacagcttccagagttgctctttcagaagaaccctggcctgtctcgtctggat ctgagcgaaaacctcatccagtccatcccaagaaaagctttccgaggagctacggacatc aaaaaccttcagctggataaaaaccacatcggctgcatcgaggatggcgccttcagagcc ttgcgaagcttggaagtgctaaccctgaacaacaacaacatcagcagcatccctgtttcc agcttcaaccacatgcccaaactgcgaacattccgtctccactccaataatctcaactgt gactgtcatctggcctggcttgcccagtggctccgacagcggcctaccattggtctgttc actcagtgcacggcaccgcccgagctcaaaggtctcaatgtggccgaggttcagaaacat gaattcagctgttcgggctaccaggattcatccagtccacaaccgtgcaatacaggcggc ggatcctgtcccgctatgtgtacgtgcagcaacaatattgtggactgtagagggaagggt ctgactgacatcccagccaacctgccggacagcatggccgaaatacgtctggagcagaat gggatcaagacagttcctccaggagctttctctccctacaagaaactgcgcaggatagac ctgagcaacaaccagatctcggaaatcgctccagacgccttccagggtctgcgctccctc aactcactcgtgttgtatggaaataagatcaccgacctgcccaagggtgtctttgatggc ctctatgccctgcaactgcttttgctgaacgccaacaagattcactgcatccgtgccaac accttccaggacctgcagaacctctcgctgctgtcgctctacgacaacaagatccaaatc ttggccaagggcaccttcgcttcactgcgagctatacagaccctccacctggcccagaat ccattcatctgcgactgtaacttgaagtggctggccgactacctgcgctccaaccccatc gagaccagcggcgcccgctgtgccagcccccgtcggctggccaacaaacgcattggacaa atcaaaagcaagaaattccgttgctccgccaaggagcagtacttcatcccaggtgccgag gatgcccgactgaataacgcctgcaacagcgatccggtgtgtcctcccaagtgccgctgc gagtctaatgtggtggactgctccaacctgaagctcaccaagatccctgagcacatcccg tcatccaccactgagctgcgcctcaacaacaatgacatcaccactctggaggccaccggc gtgttcaagagccttacccagctcaagaaaatcaacctgagcaataacaaaatcacagag attgaagacgacgctttcgaaggcgcctcgtccgtcaacgagcttcacctcacagccaat cagattgacacggtccggagtgagatgttccgtggcctggaagggctgcgcatgctaatg ctgaggaacaacaagatcagctgtatccacaacgacagtttcaccggcctccacaacgta cgtctgctgtctctctacgacaaccagttgaccaccatcacgcctggtgccttcgatacc ctgcagaccctctccaccctgaaccttctggccaactccttcaactgcgactgccggctg tcttggctgggagactggctgaggagcaagaagatcgtcacggggaaccctcgctgccag cgtccggcattcctcaaggagatccccttgcaggatgtagcgctgcccgatttccgttgt gaggaaggccacgaggactcaagctgtgtgcccagacctcagtgccccagcgagtgcact tgcctggagacggtggttcgctgcagtaacaagcacctccgcacactgcctaaaggaatc cccagaaatgtgactgaactgtatctggatggaaaccaattcagcgtgctaccaaaggag ctgtcctcctttaagttccttcagctggtggatctgagcaacaacaagatcagttctctg accaactcttcttttgccaacatgagccaactcaccaccttaatcttgagctacaacgcc ttacgctgcattcccaaaatggcctttagtggactgcactccctccggctactgtctctc catggcaacgaaatctccgagcttcctgatggcatcttcagtgacgtgtcctctctttcc cacttagcaatcggcgccaatccgctatactgtgactgccgcctgcgctggttgtcagac tgggtcaagactggatacaaagagcccggcatcgcccgctgcgctggtccacgtggtctg gaggggaaacttctgctcaccacaccagcaaagaagtttgaatgcacgggtgaggtagac acaacagtactggccaagtgtaacccgtgtctgtccagcccatgtcaaaaccaaggcgtg tgtcatagcgacccagtcgacatctacaggtgcaactgtgctccgggattcaagggcaag aactgcgagacagctctaaacgcatgcgtgaacaacccttgtgccaacggcgggcgatgc caagtggatgaggaagacgagggacagtacagctgcacttgtccgctgggtttcgagggc cccacctgccagaccaatgttgacgactgtgaggacaatgactgtgagaacggcgccacc tgcatggacggagtcaacaactacacttgtttttgtccaccctactacacaggggagatg tgtgaggaaatggaggatgtgtgcgccccaggacgaagcccctgccaacatcagtctact tgcctcatcacttcctccgggcccaagtgcgtgtgcgctcctggttacgtgggtgacgac tgcagcgtggactacgacgattgccaggagcatcgctgtcagaatggagcccagtgtgtg gacgagctgaacggatacacctgtcagtgtgaggacggctacagcggtcagctgtgtgag gttcctccttcgccgttatccatgtgcgagctggccgactgtcagaacgacgccccgtgt gtggagcggggcggccgcgccctctgccaatgccccccagagtttggcggaccgcgttgc gagaaactggtcagcgtcaactttgtggacagagactcctacctgcttctctccgacctc aagaactggccgcaggccaacatcaccctacaggtttccacggcggaggataacggcatc ctcttgtacaacggcgacaatgatcacattgcggtggagctgtaccaaggtcacgtaaag gtcagctacgaccctggcagccagcccggccatgccatctacagtgccgagaccatcaac gacggtcagttccacacggtggagctggtcacattggaccagatggtgaacctgtccatc gatgggggcctccccaccaccatggacagcttcggggcagtgcggccccttaacggagag gctccactatacgtggggggtaggggccctctccagaacacaccttcctcctcttcaggg atgccggtcggcgtgcacccaggcgccttccgcctgtggcagatccagaacagctctagt ttccacggttgcatccagaatctgtacatcaacaacgagttacaagacttcaccaagacc caaatgaagcccggtgtggtgccgggctgcgagccctgcaggaagatttactgcgtgcac ggcatctgccagcccgacggcctccaggggcccgtgtgccactgccggccgggctgggtt ggaccacagtgcgacctccccgctgccaacccctgtcaaggcagcaaatgcgtccacggc cggtgcatcccgctggacagcgagtcataccgctgcgaatgtagcgagggctaccgcggt gcgttgtgcaaccaacaaggggagctgttcaacccctgccgccggcttaactgcaaacac ggccgctgtcagatttccgacacgggagacgcctattgtcactgcgagaatggctacacc ggggatctctgtgatgcagagtcggcgtgccagggtgagcccatgcgggatttctaccag gtgcagaggggctacgccatctgccagacgacacgcaccgtgtcctgggtggaatgcagt ggcatgtgcgaggcgggagcctgctgcggcagccagcgaatgaagcgtcggaaatacacc tttgagtgcagcgacggcagcaccttcagcgaggaggtggagaagagcatcaagtgtggc tgcgtgggctgcgccgtctag

DBGET integrated database retrieval system