Syngnathus scovelli (Gulf pipefish): 125978633
Help
Entry
125978633 CDS
T08785
Name
(RefSeq) BLOC-2 complex member HPS6
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125978633
Membrane trafficking [BR:
sscv04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
125978633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
125978633
NCBI-ProteinID:
XP_049592136
LinkDB
All DBs
Position
12:6752643..6756408
Genome browser
AA seq
897 aa
AA seq
DB search
MSRFALRQLSDFEDYTGKNELHESLKTDLDNRLANVRLSADGRHVHVILHKPKVGLVTLD
KYERPQLSQVERKLDLCSTQGVPIVDLLYLDTNNNNNGINKDFVTVAVIYENGRSEFWQF
QDSKGGWSLLQTADLCNSPRARMVSVCACSNLIVWCEERPPSESSPILISPRSKLRHCIC
RRDFELKEGTVILGGVKIALHNNPRFKVVASGQYVHLLPDVKLKPLRKFFLSWCPRQDSF
RISTVCQATPLKKQSTKESDFRKLIADCLGFLSALDPPEILNVSPSACGGLLLLLNTGWV
CLLQSDGVLRQIYKMADMCPLKYSTHTSLCTYQDTLVLVLSQNLYLIDSKCGRELEMITL
DREGVLFPIKTDGSPHLLSETGLFQVVRQDTDSINLKPKLPSFTAAENINPGALLVEAVF
EEACKYYQQRSLSSTQLTVDSLKKGGRFQAPISLASILNDYLSSGPKQSAEEPSQNGEIG
GDVGEDKLKVSLEPELKALVAVEELKRALVRGSLKEVEALCESLVGKEIARLLWSSELHR
DDLLYLNSIFDVFPCQAWRAAQAALQLHYNGDGSLSSQASPDVWKTVLGPAPSFPASVPL
TNGGSKHRKSSKADHNGNCTSKSTSSASPVTLPVFELLCHSVLRFQPAQLPRFLELSQQQ
QGSAGLGLSLAASTWSFPTGGGDNGENNVPLYKRTLSVLSSARTHRDQLQELEVEVLMVS
GRPNAILQALRILAGQQQWEKVTEVAQKFCKQSPLLNKEIFTTLLCEVTQHRELDPYLDL
LWALCPEDITVTTILNLVLKNLPPPSTSSSSPLSVAFRPDSFPAPFADPQSGQVTIGLLK
PLLRKVLQRETKPSQHYADILQSPSFVPPAPPRMPTEPSKTSTDLLVDSTLVRGSTC
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgctttgcgctgaggcaactgtctgattttgaggactataccggcaagaatgag
ctgcacgagagtttaaagaccgatcttgacaacagactcgcaaacgttcgtctgagcgca
gatggacgtcacgttcatgtcatcctccacaagccgaaggttggtcttgtgactctggac
aagtatgaaagacctcagctgagtcaagttgagaggaagctggatttgtgttccacgcaa
ggcgttcccattgtggatcttttatatttggacactaataataataataatggcatcaac
aaggactttgtgactgtagctgtgatttacgagaacggacgatctgagttttggcaattc
caagattccaaaggaggctggagtctcctgcaaacagccgacttgtgtaacagtcctcgg
gcccgaatggtgtctgtgtgcgcctgctctaatctaatcgtctggtgtgaggagaggccc
ccatcagagagctcccccatcctcatctctcccaggagtaagctgagacattgtatctgc
aggagggactttgagttgaaggaggggactgtgattttaggaggggtgaaaatcgccctc
cacaacaaccctcgattcaaggtggtcgcctcgggccagtatgtgcacctccttccggat
gtcaaattgaaaccactgagaaaattcttcctctcttggtgccctcgccaggactccttc
cggatcagcacggtgtgtcaagccacccccttgaaaaaacagtcgacgaaggagtctgac
ttcaggaaactgatcgcagactgtttagggtttctgtctgcgcttgacccccctgagatc
ctcaatgtctctccttcggcttgtggaggtttgctgcttcttctcaacacgggctgggtg
tgtctcctgcaaagcgatggggtgctgcgccaaatatacaagatggccgacatgtgtccg
cttaaatactcaacacacactagcctctgcacataccaggacacattggtgctggtctta
agccaaaatctctatcttattgactcaaagtgtggtagagaactggaaatgataacacta
gacagggagggggttttatttcccataaaaactgatggatcaccgcacttgctttcagaa
actggactttttcaagtggtgcgtcaggatacagacagtattaacctaaaaccgaagttg
ccttctttcactgcagcggagaacattaaccctggagcactcctggtggaagccgtgttt
gaggaggcgtgtaaatattaccagcagaggagcctgagtagcacccaactcactgtggac
tccttaaagaaaggagggcgattccaggcacccatctctttagcatccattctcaatgac
tacctcagctcggggcccaagcagagcgcagaagagccatcccaaaatggagaaattgga
ggcgatgtgggggaggacaagttaaaagtctcactggagcctgagctgaaggccttggtg
gctgtggaagagttgaagcgggctctggtgaggggcagcctgaaagaagtggaggcgctt
tgtgagagtctagttggaaaagaaatagcccggctgctgtggtcctctgagctacatcgg
gacgacctgctctacctcaactccatcttcgacgtcttcccgtgtcaagcgtggagggcg
gcgcaagctgctctccagctccactacaacggggatggctctctgtccagccaggcgtct
ccagacgtgtggaaaactgtccttggtccggcgccgagtttcccagcttcagtccctctt
acaaacggtgggtcaaagcataggaagagctccaaagcagatcacaacggcaactgtaca
tccaagtcgacaagctccgcttcacccgtcaccctgcccgtcttcgaactcctctgccat
tcggtgttacgcttccagcctgctcagctgccgcgcttccttgagctcagccagcagcag
cagggctcggccggactggggctgagcctggccgcttccacttggagcttccccaccggt
ggaggagacaacggcgagaacaacgtgcctctctataagcgcaccctgagcgtgctgtcg
tcggcgagaacgcaccgagaccagttgcaggaactagaggtggaagtgttaatggtcagc
gggcggcccaacgccatcctccaggcgttaaggattctggctggacagcagcagtgggag
aaggtgaccgaggtggcccagaagttctgcaaacagagtcccctgctgaacaaggagatc
ttcactacgctgctgtgtgaggtgacccagcacagagaactggacccctacctagacctg
ctgtgggcgctgtgccctgaggacatcaccgtcaccaccattctgaacctggtactgaaa
aatctcccgccgcccagcacgtcgtcctcttcgcctctttccgtggccttcaggcccgac
tcttttccagctccctttgctgacccacagagtggtcaggtgaccatcggcctcctcaaa
cctctgctgagaaaagttctccagagggaaaccaagcccagccagcactacgccgacatc
cttcagtccccctcattcgtgcctcctgctcccccccgcatgcccacggaaccatccaag
accagcacagacttacttgtggacagtaccttggttcgtggttctacctgctga
DBGET
integrated database retrieval system
