Syngnathus scovelli (Gulf pipefish): 125979284
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Entry
125979284 CDS
T08785
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04137
Mitophagy - animal
sscv04141
Protein processing in endoplasmic reticulum
sscv04210
Apoptosis
sscv04217
Necroptosis
sscv04621
NOD-like receptor signaling pathway
sscv04622
RIG-I-like receptor signaling pathway
sscv04920
Adipocytokine signaling pathway
sscv05132
Salmonella infection
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125979284
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125979284
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125979284
09143 Cell growth and death
04210 Apoptosis
125979284
04217 Necroptosis
125979284
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125979284
04622 RIG-I-like receptor signaling pathway
125979284
09152 Endocrine system
04920 Adipocytokine signaling pathway
125979284
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125979284
09171 Infectious disease: bacterial
05132 Salmonella infection
125979284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125979284
04121 Ubiquitin system [BR:
sscv04121
]
125979284
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125979284
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125979284
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
125979284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
SlyX
ATG16
zf-C3HC4_2
zf-RING_6
DEC-1_N
zf-C3HC4_4
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
125979284
NCBI-ProteinID:
XP_049593314
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MAAQEPSPPSSMESNKPGFPKKILGNKLEDKHLCKCCHNILRRPFQAQCGHRFCSYCFNL
AISNGPQKCNACIKEDIFEETTSILKQGCAFPDNAVRREVENLTAVCVNESCSWRGSIKE
YEMSHEGKCEFMIVPCPSCKERIRFNEQERHSERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRMPCRFHVVGCDMSVEKEKTHDHERAFA
YEHLNLLLHYIMGMKVSMEGLQPQGLEVAGHKLVELQQSLRELEARVSQLSTTSSGPPVQ
GAAASSSSGSGPPAPAPLPPPPTLAPTLSVSTSFTPLPSSVGAALELQLHSEKTKVVELG
RRCTELEVKAGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKVRQLERTVG
LKDLTVAEMEGRLREMSASTFDGVFVWRISDFAKKRQDAVAGRAPAMFSPAFYTSKYGYK
MCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNREHIIDAFRP
DVTSSSFQRPVSEMNIASGCPLFCPFSKLDAKNSYIRDDAIFIKAIVDLTGL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccaggaaccatcgcctccctcgtccatggagagcaacaagccgggcttccct
aagaagatcctgggcaacaagctggaggacaagcacctgtgcaagtgctgccacaacatc
ctcagacgacccttccaggcgcagtgtggccatcgcttctgctcgtactgcttcaacctg
gccatcagtaacggaccgcagaaatgcaacgcttgcatcaaggaggatatttttgaggag
accacatcaatcctgaaacaaggatgtgcttttcccgacaatgcggttcggcgagaagtg
gaaaacctcacggctgtctgcgttaatgaaagttgttcttggagagggtccatcaaagaa
tatgagatgagccacgagggcaagtgcgagttcatgatcgtgccgtgcccttcctgcaaa
gagcgcattcgcttcaacgagcaggagcggcacagtgagcgcgagtgcccggagaggacg
ctcaattgcaagtactgcaaagaaccttttcacttcaagaacatcaaggcccacgatgag
atctgccccaaatacccaatgatctgcgagggctgtgccaaaaagaagatccccagagag
aagtacgtggaccacatcaagttctgcagcaaattcaggatgccgtgtcgctttcacgtg
gtgggctgtgacatgtcggtggagaaggagaagacccacgaccacgaacgggcttttgcc
tatgaacacctcaacctgctgctgcactacattatgggcatgaaggtgagcatggagggg
ctgcagccgcagggtctggaggtggcgggacacaaactggtggaactgcagcagtccctc
cgggaactggaggcccgggtctcccagctcagcaccacctcctccgggcctcccgtgcag
ggagccgccgcctcctcgtcctctggctcgggcccgccggcaccggctcccctacccccg
cctcccaccttggcccccaccctgtccgtgtctacctccttcacgccgctgcccagctcg
gtgggtgcggccctggagctgcagctccacagcgagaagactaaggtcgttgagctgggc
cgccgctgcacggagctggaagtgaaggcgggcacctttgagaacgtggtgtgtgtcttg
aaccgagaagtggagcgctttgccaccaccatggaagccagtaaccgccagcacaagctg
gaccaagacaagatcgaagctctgagtaacaaggtgcggcagctggagaggacagttggc
ctgaaggacctgacggtagcagagatggaaggtcggcttcgggaaatgtccgcctcgacc
ttcgacggcgtctttgtgtggaggatctccgattttgctaaaaagaggcaggacgccgtt
gccggtcgcgctcccgccatgttctcgccagccttctacaccagcaagtacggctacaag
atgtgtctgcggatctatctgaatggggacgggacggggcgcggcagccacttgtccttg
ttctttgtggtgatgcgggggttgagcgacgccttgctcaagtggcccttcaaccagaag
gtgaccctgatgcttctggaccagagcaaccgggagcacatcatcgacgccttccggccc
gacgtcacctcctcatctttccagcgcccggtaagcgagatgaacatcgccagtggctgc
ccactattttgcccgttctccaagctggatgccaaaaactcctacatccgcgacgacgcc
atcttcatcaaggccatcgtggacctcaccgggctctag
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integrated database retrieval system
