Syngnathus scovelli (Gulf pipefish): 125979817
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Entry
125979817 CDS
T08785
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00280
Valine, leucine and isoleucine degradation
sscv00650
Butanoate metabolism
sscv00900
Terpenoid backbone biosynthesis
sscv01100
Metabolic pathways
sscv03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
125979817 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
125979817 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125979817 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125979817 (hmgcs1)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
125979817 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
PS_Dcarbxylase
ACP_syn_III
Lectin_C_term
Motif
Other DBs
NCBI-GeneID:
125979817
NCBI-ProteinID:
XP_049594452
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Position
13:complement(4677259..4691702)
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AA seq
515 aa
AA seq
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MPGSASNNCLGPWPKDVGIIAMELYFPSQYVDQAELEQFDGVTTGKYTVGLGQACMGFCS
DCEDINSLCLTVVQRLMEKNSLSYNSIGRLEVGTESIIDKSKSVKTVLMQLFEDSGNTDV
EGIDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYASGSARPTGGAGAVAML
IGPNAPLAFERGLRGTHMQHAYDFYKPNLMSEYPVVDGKLSIECYLSALDRCYSVYRNKI
HAQWQREDSEKRFSLEDFGFLVFHSPYCKLVQKSLARLMLNDFLNHPCPNTETGPFSGLD
AFRDVKPEDTYFDRDVEKAFMKASADLFERKTKLSLLISNLNGNMYTPSVYGCLASVIAQ
HTSSQMAGQRIGVFSYGSGFAATLYSLRVSQDHTPGSALDKLICSMSDLKVRLESRKKVS
PAFFSENMKLREETHHLASYIPRGAVEDLFPGTWYLTRVDEKHRREYARRPLDNDLPSEP
ERVRCSTATEHIPSPAKKMPRIPVATSNSDNGISN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcctggttctgcctctaacaactgcttggggccgtggcccaaagatgtgggtatcatt
gccatggaactgtacttcccatcgcagtatgtggaccaagctgaactggaacagtttgat
ggtgttacaactggcaaatacacagtgggcttgggtcaagcctgcatgggcttttgttca
gactgtgaggatataaactccctttgcctgacagtggtccaaagactgatggagaagaac
agcctgtcttacaattcaattggtcgtttggaagttggcactgagagcataatcgataag
tccaagtctgtgaaaacagtcctcatgcagctgtttgaggactcaggcaatactgatgtg
gagggcattgacaccacaaatgcctgttatggtgggacagctgcacttttcaatgctgta
aactgggttgaatccagctcatgggatggccgctatgcgctagttgtagccggcgacatt
gctgtttatgcctcaggaagtgccagacctacaggcggtgccggtgctgtggcgatgctc
attgggcccaatgcgcctttggcctttgaacgaggtctgcgaggaacccacatgcagcat
gcgtacgacttctacaaacctaacctcatgtcagagtatcctgtggtagatggcaagcta
tctattgagtgctacctgagtgctttggatcgctgctactctgtgtaccggaataagatc
catgctcagtggcaaagagaggattcggagaagcgcttttctttggaggactttgggttt
cttgtcttccactcaccgtactgcaagctggtgcagaagtcattggccagattgatgctg
aacgactttctgaaccacccttgcccaaacactgagacgggccccttcagtggccttgat
gctttcagagacgtaaagccagaagacacctactttgaccgggatgttgagaaggccttc
atgaaggccagtgctgacttgtttgagagaaagaccaagctgtctttgctcatatccaac
ctgaacggaaatatgtataccccctcagtctacggctgcttggcatcggtcatcgcacaa
cacacatcttcacaaatggcaggtcagaggattggagtcttctcctatggatcaggattt
gctgcaaccctctattctctcagggtctcgcaggaccacacacctggttctgctcttgac
aaacttatctgtagtatgagtgacctcaaggtcaggttggagtcaaggaagaaggtttca
cctgctttcttctctgaaaacatgaagctcagagaagagacccaccacttagccagctac
atccctcgtggcgctgtggaggatctgtttccaggcacttggtatttgacacgagtggat
gagaaacaccgtagggaatatgccaggagacctctggacaatgacctgccttcagagcca
gaacgtgttcgctgcagcactgccactgagcacatcccgagtccagccaagaagatgccg
cgcatccctgtggctacatccaactctgacaatggcattagcaactga
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