Syngnathus scovelli (Gulf pipefish): 125979878
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Entry
125979878 CDS
T08785
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain isoform X1
KO
K06751
MHC class I antigen
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
sscv04145
Phagosome
sscv04218
Cellular senescence
sscv04514
Cell adhesion molecules
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125979878
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125979878
04145 Phagosome
125979878
09143 Cell growth and death
04218 Cellular senescence
125979878
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125979878
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125979878
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
125979878
Exosome [BR:
sscv04147
]
Exosomal proteins
Proteins found in most exosomes
125979878
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
Antigens
125979878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Psg1
C2-set_3
MHC_I_2
Nitrate_red_del
TMEM154
Motif
Other DBs
NCBI-GeneID:
125979878
NCBI-ProteinID:
XP_049594676
LinkDB
All DBs
Position
1:27608897..27629290
Genome browser
AA seq
359 aa
AA seq
DB search
MFTMNILAFFVLAVQIYSVTPVIHTLNYFDTASQVAKLPEYWYAGYVDGVQIVHFDSNHR
KAKAKQDWMDKITEGDPHYWETETAISIRAEQYFKVNIEIAKKRFNQTGGVHMLQVMEGC
EWNDETGEVDGWQHYSYDGEDFISFELKTMSWIAAHPQAFITKLKWDQNDGLNQHNKNYF
TEVCPSELKKHVSNGRDFLTRTELPRVSLLQKTPSSPITCHATGFYPRTSDLFWRKDGEQ
IHEDVEMGETLPNHDGTFQTTADLKVELTPAAEGRYECVFKLDGVREEMVTKLYAKSILS
NVRIQEEEDRKKAVAIAVPLGVLALVAMAVAVGVFLAKRPKSQQANYAPASSTSSSEKD
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaatgaatatacttgcattctttgttttggctgtgcaaatatacagcgtgacg
cctgtcattcacacgctcaattatttcgatacggcctctcaagttgcaaagctaccagag
tactggtacgccgggtatgttgacggcgttcagattgtgcactttgacagcaaccacagg
aaagcaaaagcgaaacaagactggatggacaaaatcacagaaggtgatccgcactactgg
gagacagagacagcgataagtattcgtgctgagcagtacttcaaagtcaacattgaaatc
gctaaaaagcgcttcaaccaaactggaggtgttcacatgcttcaggtgatggagggctgt
gaatggaatgatgagactggggaggttgatggttggcagcactacagttacgatggagaa
gacttcatatcatttgagctgaagacgatgagctggatcgcagcacatccgcaagctttc
atcaccaaactcaagtgggaccaaaacgacgggttaaatcaacacaataagaattacttc
actgaggtgtgtccttctgagttgaaaaagcacgtgagcaacgggagggacttcctgacc
agaaccgagcttcccagggtgtctctcctgcagaagacgccttcctctccaatcacctgc
cacgccacgggtttctaccccaggacgtcggacctcttttggaggaaggacggcgagcag
atccacgaggacgtggagatgggggagaccctccccaaccacgacggaaccttccagacc
acggccgacctgaaagtggagctgacgcccgccgcggagggccgctacgaatgcgtgttc
aaactggatggcgtccgggaggagatggtcaccaagctgtacgccaaaagcatcctgagc
aacgtgcgcatccaggaagaggaagacaggaagaaggcggtggccatcgctgtcccgctg
ggggtcctggctctggtggcgatggcggtggcggtgggggtgttcctggccaagcgtccc
aaaagccaacaagccaattacgctccagcttccagcacctcatcttctgagaaggattga
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