Syngnathus scovelli (Gulf pipefish): 125981422
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Entry
125981422 CDS
T08785
Symbol
babam2
Name
(RefSeq) BRISC and BRCA1-A complex member 2
KO
K12173
BRCA1-A complex subunit BRE
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125981422 (babam2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125981422 (babam2)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125981422 (babam2)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125981422 (babam2)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
125981422 (babam2)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
125981422 (babam2)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
125981422 (babam2)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
125981422 (babam2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
UL17
Motif
Other DBs
NCBI-GeneID:
125981422
NCBI-ProteinID:
XP_049597473
LinkDB
All DBs
Position
14:complement(14308069..14337444)
Genome browser
AA seq
386 aa
AA seq
DB search
MNNMSPEVALHRISPELRPLLCSVVRNGRVGLDSTNCLKVTDLKTGCTSLTPGPCCDRFK
LHIPYAGETLKWDIIFNARYPELPPDFIFGEDAEFLPEPSELPHLVQWDAGNPDCLLQLV
KELIQQYHHYQCQRLRESSRLLFEYDSLLEDPNYGRNMEIYAGHKNSWTGEFSARFLLKL
PVDFSNIPIYLLKDTALDPGEDVALLSVSFEDAEATQVFPKLYLSPSIEHALGGASALHI
PAFPSGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFLSHFGMGVVEYDAEGFTKL
TLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSVYHFTSSGQLYSQVQKSYPYSPRWDGNE
MAKRAKIYFKTFIPQFQEGAFANGKL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacatgtctccagaagttgcactgcacaggatctcaccggagttgcgacctttg
ctgtgcagcgtggtgcggaatggccgggtgggactggactccacaaactgcctcaaagtc
acagacctcaaaaccgggtgtacatcgttgaccccaggtccttgctgcgatcgcttcaag
cttcacatcccctatgctggagaaaccctcaaatgggatattatatttaatgcccgctat
cccgaactgcctccggattttatttttggagaagatgcagagtttctacctgaaccttca
gaattaccgcatttggtccaatgggatgctggcaacccagattgtttgctccagcttgtt
aaggagctcatccagcagtaccaccactaccaatgtcagcgcctccgtgaaagctccaga
cttctctttgagtacgatagcctgctggaggatcctaactatggccgtaatatggagata
tatgctggacacaaaaacagctggacaggggagttttccgctcgctttcttctgaaactc
cccgtggacttcagcaacatcccaatctatctcctcaaggacacagcactggaccctgga
gaagatgtggctcttctctctgtcagcttcgaggatgctgaggccactcaagtcttcccc
aaactctacctttctccaagtattgaacatgctctgggaggtgcgtctgcacttcatatc
ccagcattcccgagcggaggatgcttgattgactatgtcccacaagtgtgccagttactc
actaacaaggtgcagtatgtcatccaaggctatcacaagagacgggagtacattgctgca
ttcctcagccactttggaatgggagtggtggaatatgatgccgagggatttacaaagctt
actcttctactcatgtggaaagacttttgcttcttagtgcacgtggatctgccactgtac
tttccccgagatcagcccaccctcaccttccagtcggtgtaccacttcaccagcagcggg
cagctttattctcaagtgcagaagtcgtatccttacagcccacgctgggacggcaatgaa
atggccaagagggcaaagatttacttcaagaccttcatccctcagtttcaagaaggagcc
tttgccaacgggaaactctag
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