Syngnathus scovelli (Gulf pipefish): 125982022
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Entry
125982022 CDS
T08785
Symbol
trim37
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37 isoform X1
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125982022 (trim37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125982022 (trim37)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125982022 (trim37)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125982022 (trim37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
zf-C3HC4_2
HlyD_2
MRFAP1
PIN_8
BORCS6
Motif
Other DBs
NCBI-GeneID:
125982022
NCBI-ProteinID:
XP_049598121
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Position
15:complement(2794140..2800381)
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AA seq
936 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCSLTKHDDNGKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLVEIYEQHVSKVKEEVAKLRRRLMELISLVQEVERNVEAVRGAKDERVR
EIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESILQEVEHQLHSCSKSELISK
SPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDSSTFVLVNFSTLRQRADPVYSPP
LQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPSKNII
REFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLVLRYQVRSPTFFQKCRDQYWYIS
QLESAQSGYVQQINNLKERLAIELFRHRSLRSSSPPGSRLAAGIAASERNPRAVKSDGDI
QSTLSDDKKSGDRNDERTVHDDSNELSDGDLEVDCLTEEEVNPLDGSSTSGSSTATSNTE
ENDIDEETMSGENDVDFIGNLDTEEGELPDDLDGASGGPSSCLRSALLSSAMGRAAGVGG
GASSSAGGAVGGSLLDIDPVILIQLLDLKEHNDMESLWGLQPRPSLSLLHSQAGSSSRKE
RERHPQVVRRSAPDSAVLVRLKAQMAEVRSKMSDVKTQVLEARAASDSRPGPSGIFGAEA
APSHRADTESADGRKPGELAPLGIAAAVRSRPCHPGQKCPPSVLESCSAPLGHQRSPEQT
EKDVRGANAAPELSLHLNEAANGCAKVSDAAQASAEQASCKPQLYTPSGPRDDIFSSYLP
AAKNCGTRTLGAAMLDSESESSGNSHHSLLEGPASQPQSSEGRVASAALLIDPPPSVLAA
ATSSESDTEDEDANSRYDNRTPPCTGESLSEDMTDR
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacaaagcgtggagagcatcgctgaggtgttccgctgcttcatctgcatggag
aaactgagggacgctcgcctctgcccgcactgctccaagctctgctgcttcagctgcatc
cggcgctggctgacggagcagagagctcagtgtccacactgtcgggccccactccagctg
agggagctggtgaactgccgctgggccgaggaggtgacgcagcagctggacacgctgcag
ctgtgcagcctcaccaagcacgacgacaacggcaaagacaaatgtgagaaccaccatgaa
aagctgagtgtcttctgctggacatgcaagaaatgcatctgccatcaatgtgctctgtgg
ggcggcatgcacggcggccacaccttcaagccgctggtggagatctacgagcagcacgtg
agcaaggtgaaggaggaggtagccaagctgcggcgacgcctcatggagctcatcagcctg
gtgcaggaagtggaaaggaacgtggaggcggtgcggggagccaaggacgagcgggtgcgc
gagatccgcaacgcggtggagatgatgatcgctcgtctggacaaccagctgaagaataaa
ctcatcacgctgatgggccagaagacatccttgacccaggagacggagctgctggagtct
atcctgcaggaggtggaacatcagctccactcgtgcagtaagagcgagctgatctccaag
agtccggagatcctgctcatgttccagcaagtccacagaaagcccatgcagtcgtttgtc
accacgccggtgccacccgacttcaccagtgagctggttcccgcatacgactccagcacc
tttgttttggtcaacttcagtactctgaggcagcgggccgacccggtctacagccctcct
ctacagatatccggactctgttggaggctcaaagtatacccggacggcaacggtgtggtt
cgcgggaactacctgtctgtgttcttggagttgtccgccggactccccgaaacctccaag
tatgagtaccgcgtggagatggtccaccaggcctccagcgaccccagcaagaacatcatc
cgcgagtttgcctcggactttgaagtgggcgagtgctggggctacaaccgcttcttcagg
ttggacctgctggccagcgagggctacctgaacatgcagacggacacgctggttctacgg
taccaggtgcgatcgcccacgttcttccagaagtgcagagaccagtattggtacatcagc
cagctggaatctgctcagagtggctacgtccagcagatcaacaacctcaaagagaggttg
gccatcgagctgttccgccaccgctcgttgcgcagctcctcgccccccggctcgaggctg
gcggccgggatcgcggcttccgaaagaaacccccgcgccgtcaaaagcgacggcgacatt
cagagcacgctgagcgacgacaaaaagagcggcgaccgcaacgacgagcggaccgtgcac
gacgactccaacgagctgtccgacggcgacctggaggtggactgcctgaccgaggaggag
gtgaacccgctggacggcagcagcacctcggggagctccacggccaccagcaacaccgag
gagaacgacatcgacgaagaaaccatgtcaggcgagaacgacgtcgacttcatcgggaac
ctggacacggaggaaggagaacttcccgacgacttggatggagcctccggtggccccagt
tcctgtctgcgctctgcacttctcagctccgctatgggacgagctgccggcgtaggaggc
ggggcctcctcctccgccggcggtgctgtcggcggcagcctcctggacatcgaccccgtc
atcctcatccagctgctagacctgaaggagcataacgacatggagtccctgtggggtctt
cagcctcgaccttcattgtcgctacttcacagccaagctggttcatcctccaggaaagag
cgtgagcgccatcctcaggtggtgcgtcgctccgccccggactcggcggtcctcgtccgc
ctcaaggcgcagatggccgaggtgcgcagcaagatgtccgacgtcaagacacaagtgctg
gaggcccgagcagctagcgattccaggccgggcccgtcgggaatcttcggcgctgaagcg
gcgccttcgcaccgcgccgacacggaatcggcagacggacgcaagcctggcgagctggcg
ccgctcgggatagcggctgcagttcggtcccggccttgtcatcccggacaaaaatgcccg
ccgtctgtcctggaaagctgcagcgcaccgctaggtcatcagaggagtccggagcagaca
gagaaagacgtcagaggagccaacgcagctccggaactcagcctgcatctcaacgaggcc
gctaacggttgcgccaaggtgtcggacgctgctcaggcctcagcggagcaggcgtcctgc
aagcctcagctgtacacgccgtcggggcccagggacgacatcttctccagctacctgccg
gccgccaagaactgcggcacccggaccctgggggcagccatgttggactctgaatcggaa
agctcaggaaactcgcatcattccttgctggagggacccgcatcgcagccacagtccagc
gaaggccgggttgcctcagcagctctcctcatagatccgccgccatctgtcctggcggcg
gcgacgagcagcgagagcgacacagaggacgaggacgccaactctcgctatgacaaccgg
actccaccctgcacaggcgagtcactctccgaagacatgactgacaggtga
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