Syngnathus scovelli (Gulf pipefish): 125982666
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Entry
125982666 CDS
T08785
Symbol
smpd1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00600
Sphingolipid metabolism
sscv01100
Metabolic pathways
sscv04142
Lysosome
sscv04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
125982666 (smpd1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125982666 (smpd1)
09143 Cell growth and death
04217 Necroptosis
125982666 (smpd1)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
125982666 (smpd1)
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Motif
Pfam:
Metallophos
ASMase_C
Motif
Other DBs
NCBI-GeneID:
125982666
NCBI-ProteinID:
XP_049599573
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Position
15:4460437..4463812
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AA seq
591 aa
AA seq
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MTQFPLPQLRLGLLTCALLLVLPLEVPCNPTLISGQPNLVMERLPMFKFNWTSISCRACH
VIFTILDVALLSDLNEERVARAVGKACVRLHLADEQVCREITELFRDDFIRALQESLLWP
SEACGLLLGPPCGKFDIYASWNVTLPKDPKPPVKPPVPPKPGSPKSRVLFLTDIHWDREY
VTGSAADCKEPLCCRNDSDAPKWRRREAGYWGTYSKCDLPLRTVGNLLENIARSGPWDWV
YWTGDIPAHNVWSQTRKQQLSALTVITRLIQKHLGPNVTVYPAIGNHESTPVNSFPPPFV
HGNRSAAWLYDTMADEWSKWLPKQTLKSLRYGGFYTTEIQPGLRLVSLNMNFCARENFWL
MVNSTDPANQLQWLVHVLQASEDKGEKVHIIGHIPPGLCLGSWSWNYYHIINRYESTITG
QFFGHTHFDEFQMFYDEKTLNRPLGVAFISPSVTTYINLNPGYRVYYVDGNYQSSSRMVL
DHETYILNLTEANYKLGEPQENPKWTLLYRATEAYGLSSLFPSDLDGLVRGFFGDDRLFR
KFWYFRHKGHVSVPCEETCKTGILCFLKSGRNDLLQHCDFINGVKVRKSLC
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgacacagttccccttgccgcagctccgcttggggctgctaacctgcgcgctgctgctc
gtgttacctttggaggtcccctgtaacccgacactgatctcgggtcagccaaatcttgta
atggagcgtctgccaatgttcaaattcaactggaccagcatctcctgccgcgcgtgtcac
gtcatcttcaccattctggatgtggctctcctgagtgacctaaacgaagagcgagtggcc
cgcgccgttggcaaggcctgcgtccgcctccacctggccgatgagcaagtgtgtcgtgaa
ataaccgagcttttccgggacgacttcatccgggccttgcaggagtccctgctgtggccg
tcggaggcgtgcggcctgctgttgggccccccttgcggcaagtttgacatctacgcctca
tggaacgttaccttgcccaaggaccccaagcctcctgtaaaaccacctgtcccgccgaaa
cccggatcgccgaagagcagggttctgtttctcacagacatccactgggacagggaatac
gtgaccggtagtgcagccgactgcaaggagcccctctgctgccgtaatgactccgacgcc
cccaagtggcgacgcagggaagcgggctactggggaacatatagcaagtgtgacctcccg
ctaaggacggtgggaaacctcttagaaaatatagccaggtccggaccctgggactgggtc
tactggacgggagatataccggcccacaacgtctggtcacaaactaggaaacagcaactt
tctgcacttactgtcatcaccaggctcatacagaaacacctcgggccgaatgtgacggtc
taccctgctattggaaatcacgagagcacaccggtgaacagcttcccacctcctttcgtt
cacggcaacagatccgccgcctggttatatgacaccatggctgacgagtggtcaaaatgg
ctgccgaagcagacgttgaagtcgctcagatacggaggattttacacaactgagatccag
ccgggtttgagactggtgtccctcaatatgaacttctgcgctcgggagaacttctggctc
atggtgaactccaccgaccctgccaaccagctccagtggctggttcatgttcttcaggcg
agcgaagacaagggggagaaggttcatatcattggtcatattccacctggtttgtgtttg
ggaagctggagttggaactactatcatattatcaacagatatgaaagtaccatcacgggt
cagttttttggacacacacacttcgatgagttccagatgttttacgacgagaagaccttg
aatcgtccactgggcgttgcgttcatttctcccagtgtgaccacctatattaatttaaat
ccaggttatcgtgtctactacgtcgatggaaactaccaaagcagttccaggatggttctg
gaccacgagacctatatcctcaacttgactgaggctaactacaaattgggagagccccaa
gagaaccccaagtggactctgctgtaccgcgccacggaggcttacgggctgtccagcctt
ttcccctccgacttggacgggctggtgcggggcttcttcggggacgaccgcctcttccgg
aaattctggtacttccgacataaggggcacgtttccgtgccgtgcgaggagacgtgcaaa
actggcatcttgtgctttttgaaaagcggcaggaacgacttgctgcagcattgtgatttt
attaatggtgtcaaagtgaggaaaagtctgtgttag
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