Syngnathus scovelli (Gulf pipefish): 125983337
Help
Entry
125983337 CDS
T08785
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125983337 (scn4ab)
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
125983337 (scn4ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Na_trans_assoc
IQ_SCN5A_C
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
125983337
NCBI-ProteinID:
XP_049600444
LinkDB
All DBs
Position
16:complement(7212525..7225402)
Genome browser
AA seq
1610 aa
AA seq
DB search
MRRKTFWDFWGNSKEQEEVVRRAAQLKPFTSELKMLLGNGALRAQLENSKMVSLLPPAGT
NVFRHFTPGSLKEIQRCREVQEKEQQKREDENISQVTVANPAGDLESGKPLPFIFGDPSP
EFVNTPLEDLDPFYQSQKVFIVLDGQKVIHRFNADPACYMLTAFNHVRTSAIKVLLHSFF
RAFILLTILTNCVFMTVQEPLKQTRIVKFAIIAIYAIEVLVKVAARGFCVGRFTFLRDPW
NWLDLVIISTAYLTEMVNLGSLSGFLQVLPALKLIPALPSVKKTLGALTRVVRKMNHVIA
LSLGCLIVLAALELHNFMGYLRSKCMVIPSSNDSFIDHITDPANYYYLPGHTEAQLCGNR
SDAGTCPEGFICLLGGPNPNYGYTNFDSFGWAFLALLRLMTQDFWEDLFRLILHSGGKSY
TINFLADILLASFSLGSLIVAVIAVAFVEQKQAETAEAEQRSKDYAEIVETLKKQEKVDG
SGGLDEKPRSEREDEQRPCSPCCSAFTAIFIKWTCCDGCRPKQLLHRVVSDPFFDLFVVI
CLLLNITFMAMEHFPLTYQFEEMLSIAALVFTMIFAVEVALRFLATGPYFFFQVGWNIFD
MVIAVITVLELGLMFISGLSFLRLVCVMRVFRLARWWPNFNALLKLIRSSLGVLRRFTLL
LLIIIFIFAAMGFRIFGRDYKENVCRISKDCSLPRYHMADFIHAFLLTFRVLCGEWIETM
WDCMQVAGEPACLFFYATMVVVTKLALLNLFLALLIKSPNGDHQTASEVEAQKNLRVALN
RISGAVMGVKSQVLGHPSKKTGWKANLNPPGLKSDELDKKEFLTLTFVNTEEPESEVKTC
DEAFKSASANRDANEENNHGDSGAGLRKPDDRDTPAQCFCDQCYRCCPVLNMNSCPAGLK
IWSNWRRMCVSVVDNKYIEAFVTFVILLSSCALAVEDIYLEKRVVLRSVLEYADYVFTCI
FVLEMLLKWFAGGFKKYFTDAWCWLDFVVVLISLLSTFATLLGVPQLKAFTSLRTLRPLR
LLSRFSGTKVVATTLFGVFPAILDVLLACLTLWLIFSIMGVNLFAGRFYSCVNGTSMKQD
VNNKTECFMLINSNYSEVRWHNPQVNFDNVGMGFLSLLQVATVKGWLDLMNSAMDSKQID
SQPEYEANVFKSFYFVFFIILGSFFTFNFLISTIIEHLKWQKAKLGAMGIFMTQDQMTLY
DSLKAFSQKKTQRSVPRPQNKIQGLLFDLVTKDFFDIAFTVVACIQVLVLMVGTWDESME
KVKIINWIDFAIIVIFTAECVLKLIALRRHYFAFGWNIFDFVLVVLFILGLVLGDVVDKY
FTFTRPFFSVIRLTRIFRVLHLFRFAKGVRRLLYILMRSLPALFNIGLFLSLIMFTFCVF
GMQHFAYVKKRALMDDVFNFETFGNAFICMFTMTTLAGWDGLLRPIMSGPPDCDPDVGNC
GRPVVGILFLTSYVIMSFLVVVNMYIVVILENFNMAAEESIDELCEMFYDTWERFDPHAS
GLIHSSQLSDFCDSLKEPLRIAKPNGIKVSNMDLPLVPEDKIHYLDLLLALTAKVQGMSG
ERDQLKARMEEKFKARHQAINKREDDAAIIIQRAYRKHAAQSPVQTGAQN
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaaaacattttgggacttttgggggaattcaaaggagcaagaagaagttgtg
aggcgagctgctcaactgaagccattcacttcggaactgaaaatgttgctgggtaacggt
gctttgcgggcacagttggagaatagcaagatggtgtctttgctgccccctgctggtaca
aatgtcttcaggcactttacacctggctcactgaaggagatccaacgatgccgtgaagtc
caagaaaaggaacaacagaaaagagaagacgagaatatctcgcaggtgacagtagcgaat
ccagcaggtgacttggagagtggcaagccccttcctttcatctttggggacccatcccct
gaatttgtcaacacccccctggaagatctggatcccttctaccaatcacagaaggtcttc
atcgttctggatggacaaaaggtcatccacagatttaatgcagatcctgcttgttacatg
ctgactgccttcaaccatgtgaggacctctgccattaaggtcctccttcactcctttttc
cgagcttttatcctgcttaccattttgaccaattgcgtgttcatgaccgtacaagagcct
ctaaagcagaccaggattgtcaagttcgctattatcgccatctacgcaattgaggtgctc
gtcaaagttgcggctcgaggtttctgcgtcggtcggttcaccttcctcagggatccgtgg
aactggctggacttggtgatcatcagcacggcatatctgacggaaatggtcaatttgggc
agcctttctggattcctacaagtcctcccagcactcaagctcatcccagccttacccagt
gtgaagaaaacactcggagcgctcacgcgagtggtgaggaagatgaatcacgtgatcgct
ctgagcctggggtgtctgatcgtcctcgctgcgctcgagctgcataactttatgggctac
ttaaggagcaagtgtatggtgataccctcaagcaacgactcgtttatagaccacatcacc
gaccctgcaaattattattacctgcctggacacactgaagctcagctgtgtggaaaccga
tccgatgccgggacctgcccggagggttttatttgtctgcttggggggccaaacccaaat
tacggctacacaaattttgattcctttggctgggctttcctggctctactgagattgatg
actcaggacttctgggaggaccttttccgactgatattgcactcaggtggcaaaagctac
accatcaacttcttggcggacattttgctggcctctttttctctcgggagtctgattgtg
gcagtgatcgccgtggcgtttgtggagcagaagcaggcggagacggccgaggccgagcag
aggagcaaagactatgctgaaattgtggagacgctgaagaagcaagagaaggtggacggc
agtggtggcctcgacgagaagccccgttcagaacgtgaggacgagcaacggccatgttcg
ccgtgttgctcggcgttcaccgccatcttcatcaagtggacttgttgcgacggctgtcgg
cctaagcagctgctccaccgcgtcgtctccgatcccttcttcgatctcttcgtcgtcata
tgcctcctgctcaacatcaccttcatggccatggagcatttccccttgacgtatcagttt
gaggagatgctctctattgcggcgctggtcttcacgatgatttttgcagtggaggtagcc
ctgagatttctggccacgggtccctacttcttcttccaggttggatggaacatctttgac
atggtcattgctgtcatcacggtgctggagttgggattgatgttcatttctggactgagc
tttttaagattggtctgtgtgatgagagtgtttaggttggccagatggtggcccaacttc
aacgcgttgctcaagctcatcagaagctccttgggcgttctgaggcgcttcactcttctt
ctgctcatcatcatcttcatctttgcggccatgggatttcgaatctttggaagggactac
aaagagaatgtgtgtcgcatctcaaaagactgctcgcttcctcgctaccacatggcagat
ttcatccacgccttcctcctcaccttccgagttctttgcggagagtggatcgagacaatg
tgggattgcatgcaggtcgcaggggagcctgcatgtcttttcttctacgcgactatggtg
gtggtcacaaagctggcgcttttgaatctgttcttggccttgttgatcaaatcacccaac
ggagatcatcagacagcttcagaggtagaagcacaaaagaatctgcgggtggccctcaac
cggatcagcggggccgtgatgggcgtaaagtcccaggtcctggggcatccgagcaagaag
acgggatggaaggccaatctgaatcctcctggtcttaagagcgatgagctggacaagaag
gagttcttgacacttactttcgtaaacaccgaagagccagaatctgaagtcaagacctgt
gatgaagccttcaaaagtgcatctgcaaatagagatgctaatgaagaaaataaccacggc
gactcgggagcgggattgcgcaaacccgacgaccgagacacacctgcccagtgcttctgt
gaccagtgttaccgttgctgtccagtcctcaacatgaactcatgtccagcaggactcaaa
atctggtccaactggaggagaatgtgcgtctcagtggttgataacaaatatattgaggct
tttgtgacctttgtaatcctcctgagcagctgcgctctggccgtcgaggacatctatctg
gagaagcgagtggtgctcaggagcgttttggagtacgccgactacgtgttcacatgcatc
tttgtgctggagatgcttctcaagtggttcgcaggtggattcaaaaagtacttcaccgac
gcctggtgctggctggacttcgtcgttgtgctcatatctctactctccacgtttgctacc
cttctgggcgttcctcagctgaaagcctttacgtctctgagaactctgagacccctcagg
ctattgtcccgcttcagcggcacaaaggtggtggcgacgacactcttcggagtcttcccg
gccatcttggacgtgttgctggcttgtctgaccctctggttgatcttcagcataatggga
gtgaatttattcgccgggagattttattcctgcgtcaacggcacttcgatgaagcaagac
gtcaacaacaagacggagtgcttcatgctgatcaactctaactactctgaagtccgctgg
cacaatccccaagtcaattttgacaacgtggggatgggcttcctctcgcttctgcaagtg
gcaactgttaaaggctggttggacttaatgaactcagcaatggactccaaacaaattgac
tcacagccagagtatgaggccaacgtgtttaaatccttctacttcgtctttttcatcatt
ttgggctccttcttcacgttcaacttcctcatcagcactatcattgagcacctaaagtgg
cagaaggccaagttgggagcaatgggaattttcatgacacaggaccagatgacactgtac
gattccctgaaggcgttcagccagaagaaaacccagaggtctgttccccggccacaaaac
aagattcaggggttgctctttgacctcgtgaccaaagacttcttcgatatcgcgttcacg
gtggtcgcttgtatccaagtgctggtcttgatggtgggaacgtgggacgaaagcatggaa
aaggtcaaaattatcaactggatcgactttgctatcatcgtcatcttcacagccgagtgc
gtgctgaagctcattgcgctccgacggcactactttgcgtttggatggaacatctttgac
tttgtgctggttgttctcttcattttgggattggtcttgggagatgtggtggacaaatac
tttacttttacgcgtccattcttcagcgtgattcgattgacccgcatcttccgggttctt
catctcttccgtttcgcgaagggagtccgaaggctgctctatattttgatgaggtcactt
cctgccctcttcaacatcgggctcttcctctccctcatcatgttcaccttctgcgtcttt
ggcatgcaacactttgcttatgtgaagaaaagagctctgatggatgacgtgtttaacttt
gagacattcgggaacgcgttcatctgtatgtttaccatgacaacgttggccgggtgggac
ggattgctccggcccatcatgagcgggccgccggactgcgatccggacgtgggaaactgc
ggtcgaccggtggtgggcatcctcttcctcacgtcttatgtgatcatgtccttcctggtg
gtggtcaacatgtacatcgtcgtcattttggaaaatttcaatatggccgccgaggagagc
attgacgaactctgcgagatgttttatgacacgtgggagaggtttgacccacacgcctca
ggcttgattcattccagccagctgtcagatttctgcgacagtctgaaagagccgctgaga
atcgccaaacccaacggaatcaaagtgagcaacatggatttgcctctggttcctgaagac
aagatccactatttggacctcctgttggccctcactgctaaggtgcagggaatgtcagga
gagagggatcaactaaaagctcgcatggaggagaagttcaaggcccgccatcaagccatc
aacaagcgggaagatgacgccgcaatcatcatccagagagcgtacaggaaacacgcagcg
cagtccccagtccaaacgggagcccaaaattga
DBGET
integrated database retrieval system
