Syngnathus scovelli (Gulf pipefish): 125983657
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Entry
125983657 CDS
T08785
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04020
Calcium signaling pathway
sscv04510
Focal adhesion
sscv04540
Gap junction
sscv04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125983657 (pdgfab)
04020 Calcium signaling pathway
125983657 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125983657 (pdgfab)
04540 Gap junction
125983657 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125983657 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sscv04052
]
125983657 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
sscv00536
]
125983657 (pdgfab)
Cytokines and neuropeptides [BR:
sscv04052
]
Cytokines
Growth factors (RTK binding)
125983657 (pdgfab)
Glycosaminoglycan binding proteins [BR:
sscv00536
]
Heparan sulfate / Heparin
Growth factors/receptors
125983657 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
TraY
Motif
Other DBs
NCBI-GeneID:
125983657
NCBI-ProteinID:
XP_049601065
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Position
16:9982393..9992767
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AA seq
218 aa
AA seq
DB search
MRAAIYYYYFLLWTTYLLLATAQEVQHFPQELIDRLSRSEIHSISDLQRLLEIDSVGTGN
DVIEASEPRKNQRERQHRHKNSSRHPAYDGDLKSSQLHGRRRRKRSIVEEAVPAACKTRT
VIYEIPRSQVDPTSANFLVWPPCVEVKRCTGCCNTSNVRCQPSRKHHRTVKVAKVEYVKR
RPKLKEVLVRLEDHLECVCMSQHHAAAEHSDAETVDVR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcaatttactattactacttcctgctgtggacgacgtaccttctgctggcc
accgctcaggaagtgcagcactttcctcaggagctgatcgacagattgtcccgcagtgaa
atccacagcatcagcgacctccagcggctactcgaaattgactccgtaggtacgggaaac
gatgtcatcgaggcctcagagcctcgcaagaaccagcgcgagcgacagcaccggcacaag
aattcttcccgccacccggcttacgatggcgacctgaagagctcgcagctacatggccgc
cgccgccgcaagagaagcattgtggaggaggcggtgccggcagcgtgcaagacgcggacg
gtgatctatgagatccccaggagccaagtggaccccacctcggccaacttcctggtatgg
ccgccctgtgtggaggtgaagcgctgcacaggctgctgcaacactagcaacgtgcgctgc
cagccctcgcgcaagcaccaccgcaccgtcaaggtcgccaaggtggagtatgtcaaaagg
aggcccaagttgaaagaggtcttggtacggttagaagaccacctggagtgcgtgtgcatg
tcgcagcatcacgccgccgcggagcactcggatgcagaaacagtggacgtgaggtga
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