Syngnathus scovelli (Gulf pipefish): 125984104
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Entry
125984104 CDS
T08785
Name
(RefSeq) low density lipoprotein receptor a
KO
K12473
low-density lipoprotein receptor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125984104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125984104
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125984104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
hEGF
Psg1
Motif
Other DBs
NCBI-GeneID:
125984104
NCBI-ProteinID:
XP_049601952
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MDPLYVLLAFLIYSQHQTTSALTACDNKFSCGNGRCITARWACDGTDDCGDGTDELPETC
LAKTCRATDFTCADRFYRCVPNTWRCDGNPDCENGADEEHCAPKNCTSTEFRCANGQCVS
TSFVCDEEADCDDGSDEASCPPITCSSSSFQCNNSVCIPRLWACDGDLDCDDGSDEWQQN
CHASLPIHRCSSLEFLCGSGECIHGNWRCDGGADCRDRSDEADCVRPTCRPDEFQCDDGD
CIHGRHQCNHRYDCRDMSDERGCVNATECDGTTRFKCHSGECISMDKVCNKERDCWDWSD
EPARECGVNECLFNNGGCSHICKKHKIGFECLCPTGYRLASTNHCEDIDECANPDTCSQI
CINQVGSYKCECEEGYQVDPSTKACKAIGTIAYLIFTNRHEVRKMTLDKSEYTQVIPRLK
NAVALDMNMATKEIFWSDISQKKIYRTQMDSANDSTHHTEMVSNDIDAPEGIAFDWIHRN
LYWTDSIRSTISVVTADGDRRKTLFSRGVSKPRAIVVDPFSNFVYWTDWGNPAKIEKGGL
NGGDRIALVTDNIVWPNGITLDLLNQRLYWVDSKLHTLSSIDAQGGGRHTIIIDEHKLSH
PLGITVFEEKVFWTDVSNNAIFSANRLTGRDIIPVAEHLSSPEDIILYHNLKQPAGRDWC
QVSNNGCEFMCLGAPQVGRHPPKYTCVCPDSMMLASDMRSCIPVVSTPAASMPPQIPTTN
QPELQTVPPKPHTTIAPITSTRLVVKPTTSTSRPLLRTSTPEIRRTSPQPTKPKAAQTTT
QTSVTFQDLHHDSSVVLPTISSSTPITLYIVLPLVIICMLAVAGVLLWKNYKIKNTNTIH
FDNPVYQKTTEDQVHIWRNDNSDGYSYPRKQVVSLNEEADNPTFNEN
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggatccgctctatgtgttgttggcatttctaatctactcccaacatcaaacaacaagt
gcattgacagcatgcgacaacaagttctcctgtgggaatgggagatgcatcacagccaga
tgggcgtgtgacggcacggatgactgcggagatggcacggacgagcttcctgaaacttgc
ttggccaaaacatgtcgagcaacagatttcacttgcgccgatcgcttttaccggtgtgta
ccaaacacttggcgctgtgatgggaacccggattgtgagaatggagctgatgaagagcac
tgtgcgcccaaaaactgcacaagcacagaattccgctgcgcaaacggccagtgcgtgtcc
acctcctttgtgtgcgacgaggaagcagactgcgacgatggcagcgacgaggcctcctgt
ccaccgattacgtgcagcagctcttcttttcagtgcaataacagcgtttgcattccccgt
ttgtgggcctgcgacggcgatttggactgtgatgacggctcggacgagtggcagcagaac
tgccatgcctctttgccaattcaccgctgctcttccctggaattcctctgcgggagcggg
gagtgcattcacggaaactggaggtgtgatggaggagctgattgccgtgatcgatccgat
gaagctgactgtgtccgtcccacctgccgccctgatgaattccaatgtgatgatggcgat
tgcattcacggaaggcaccaatgcaaccatcgctatgactgcagggacatgagtgatgaa
agaggctgtgtcaatgcaactgaatgtgacggcacgacccgatttaaatgtcacagcggc
gagtgtatcagcatggataaggtctgcaacaaggaacgtgattgctgggattggtcagat
gagcctgcgagggaatgtggcgtcaacgaatgtctcttcaacaacggcggctgctctcat
atctgtaagaaacataaaatcggttttgagtgtctttgtcccactggatatcgactggcc
agtacaaatcactgtgaagatattgatgagtgcgccaatccagacacctgcagtcagatc
tgcattaaccaggtgggcagttacaaatgcgagtgtgaagaaggttaccaagttgacccc
tcaaccaaagcctgcaaagccattggaacaatcgcttaccttatcttcaccaatcgccat
gaagtcagaaagatgaccttggacaaaagtgaatacacgcaggttattcctcgtctaaag
aacgctgtggctctggacatgaacatggccaccaaagaaatcttctggtcagatatctct
caaaaaaagatctacagaacacaaatggattcagcaaatgactcgactcaccacactgaa
atggtttctaatgacatcgatgcacctgagggtattgcctttgactggatccatcgcaac
ctctattggaccgatagcattcgtagcaccatttctgtggtaaccgctgacggtgatcgt
cggaaaactctcttttcccgaggcgtatctaaaccccgagcgattgtggttgaccctttc
agcaactttgtttactggaccgactgggggaatcctgcaaaaatcgaaaagggaggtctg
aatggaggtgaccgcatcgctctggttaccgacaacatcgtgtggcccaatggaatcaca
ctcgacttgttgaaccagcggctctactgggtggactcaaaattacacaccctctccagt
attgatgcacaaggtggtgggcggcacaccattattatcgatgaacataagctcagccac
ccgttgggaatcactgtttttgaggaaaaggtgttctggacagatgtcagtaacaatgcc
atcttcagtgctaatcgattgactggcagagacatcattccagtggcagaacatttatca
tctccagaagatatcattctgtaccataatctaaaacagcccgctgggagagactggtgt
caggtgtctaataacggctgtgaattcatgtgcctgggagctccacaagttggaagacat
ccccctaaatatacctgtgtctgtcctgatagcatgatgctagcaagtgatatgaggagt
tgcatcccagtggtctcaacacccgcagcttctatgcctcctcaaattccaaccaccaat
caacctgagctgcaaacagtcccacctaagcctcacaccaccattgctcccatcacaagc
acaagacttgtggtcaaaccaacgacaagcacctccaggcctttgctcagaaccagcaca
cctgaaattaggagaacttcaccacagccaacgaaacccaaagccgcccagaccaccaca
caaacttcagtcacgtttcaagatcttcaccatgactcttctgtagtgctacctacgata
tcctccagcaccccaattaccttatacattgtcctacctttggtgatcatttgtatgctg
gctgtggctggtgtgctgctgtggaagaactacaagataaaaaacaccaacaccatccac
tttgacaatcctgtctaccaaaaaaccacagaggaccaagtgcatatttggaggaacgac
aactctgatgggtattcctacccaagaaaacaagttgtaagtctgaatgaagaggcggac
aacccaacattcaatgaaaactag
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