Syngnathus scovelli (Gulf pipefish): 125984995
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Entry
125984995 CDS
T08785
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1 isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125984995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125984995
Membrane trafficking [BR:
sscv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
125984995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RUN
FYVE
GOLD_2
Rod_CreS
RUFY4
BopA_C
Motif
Other DBs
NCBI-GeneID:
125984995
NCBI-ProteinID:
XP_049603336
LinkDB
All DBs
Position
17:complement(11973317..11986726)
Genome browser
AA seq
1471 aa
AA seq
DB search
MTSSGSSVGQNQLHRIIRDLHDAVFQLSQEYKDLAEPVTDDSTNLRKFFYKLEYLLQFDL
KEKTTFLGQRKDYWDYFCDCLIKIKGANDGIRFVKSISELKTSLGKGRAFIRYALVHQRL
ADTLQQCLINEKVTSDWYYARSPFLDPNLTSDIINHLYELNQIQFDVAARGYDLDIDWPA
FARRTLEAGSSSLLWKPPSRCSSVNSLIQVENAMYEMHYLFEYDMEDFFHQQEVPVPDLN
LRGDLAQAEASLRSVAENLRLELDQSEVRQQELLRQVEELGKEAAHLKDVVKNLKEQLVA
AQKTTSLLDPSASMDVRNHYQTCWDEKNCELQDRLAATENKNMELLSKLDETIKEKGKQT
SSFCESAWKIQELLEKLKSTEEKRLEAKREAEDRARYCDRVSQELKLREEELRTCAEKLA
DAKSRGQDERAETLKRLEELQGAVGRIQGALTLKEKESGNLRAQLQGLQASLECRERQAE
ELRRRLQEERDEIERRCTDRDSQNETLEVQLLDLRKTLKSRERELSVSSERIKYLEEHLE
KVNKEKESLSFRLGDIDLNASVETGKLDNCKSQLTALLQAVKKSEDSVVELTQGREALLD
QLAVLRASEKHLKGRLEAAHLCTEDREKKFLDENCHLEELVQKALLEKQRLEAQQKSVEQ
ENLDLLEVQSSLKKQLTEAQEEVDLLNAKVSNLDENLTGSQKSHAELLMKFQQMEVKLKD
QTAKCGLLQERVEELESRASEQHDEKGAAESNEKTPKLHEEHLTPDSKEAPFRLVIAEAQ
LELNLREVHRLREEVVELRAQLLAGTEEKMKAQAFQEVTEASREDLRVLVEQLKGQVEEL
NRRHVDEILRSREREEALIRERDCEALARAGLAAEVTANKEELHTLKQRYDALCLENSES
GEALHRANTETAELGVRVCTLTAENEEARLRLETLSERQQALEEEATRMDACTEQLRREN
QQLVGKLRHQDDLWAMTQKLQEELTKVQEEAEALQEKSRQEMEALRLELSSQAISHSSQL
QSVNEELMDERLQMMSEQEKAVEVEKQLKRWKTEVQRYRQHLAEKTIQMAQSENLLQQKE
DELIQLRKNLSRCQEELDMTQKACQELRDTLRKVTLDKQNLDLRTAAELDDLYRTKVNLE
ERLVELIRDKDALWQKTDALEFEQKLRDEETERDVNYCLGCRTPFGWLLRKHSCRSCGRP
FCHYCLANAASYQMGGTRELCCRDCRNQVSGEEERPPQEDTVTSTPGSAFGRLLQPLRAV
TSLLGVDEGDNQEDGIFDIITEDEVSGISDGDSFVTACSSGHGQQEAAQLSCSSASTGDL
SSEVLEDQRGAMQDAEICLLKSGELTLTSCFGLDDISSFGDSSRELFIKSNCYSTVPISA
GWSGATVCWTFTSEPKGISFSVVFQESAHTTLEQAKVLIPLTRCNSHKETIRGEMKVRKA
GEYILIFDNSFSRFISKRVMYHLAVDAGGLP
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgacctcctcaggctcatcagttggccaaaatcagctgcataggatcatcagagatctc
catgatgctgtttttcagctgagccaagagtacaaagacctcgccgagcccgtgaccgac
gacagcaccaacctgcgcaagtttttctacaaactcgaatacctgctacagtttgacctg
aaggagaagacaacctttcttggccagagaaaagactactgggattacttctgcgactgc
ctgattaagatcaagggcgctaatgatggcatccgttttgtaaagtctatctccgagttg
aaaacctcattgggcaaaggaagagccttcattcgctacgcgctggttcatcaacgactt
gccgacacactccagcagtgtctcatcaatgagaaagtcacaagtgactggtattacgcc
cggagtcccttcctcgacccaaacctgacctcagacatcataaaccacctgtacgagctc
aaccagatccaatttgacgttgcagctcggggttacgatctggacattgattggccggcc
tttgctagacggacgttagaggccggctcatcatcactcctgtggaaaccccccagtcgt
tgctccagcgtcaacagtctgatccaggtagaaaacgcgatgtatgaaatgcattattta
tttgaatatgatatggaggacttcttccatcaacaggaggtccccgttccagatttgaat
ctccgtggggatctcgcacaagcagaagcatcccttcgcagtgttgcagagaatctgcgc
cttgagctcgaccaatctgaggtcaggcagcaagagcttctgagacaggtggaggaatta
ggcaaagaggcggcccatctgaaagatgtggttaagaaccttaaggagcagttggtagca
gctcagaaaactaccagtttgctggatccttccgctagcatggacgtccgtaaccactat
caaacatgttgggatgaaaaaaactgtgaacttcaagacagacttgcagccactgagaac
aaaaatatggagcttctctctaagttggatgagactataaaagaaaagggcaaacaaaca
tccagtttttgcgaatcagcctggaagatccaagaactcctagagaaactgaagtcaaca
gaggagaagaggctggaggccaagagggaggctgaggatcgggccaggtattgtgatcgt
gtgtctcaggagctgaaattgagggaggaggagttgaggacctgcgcggaaaaactggct
gacgcgaaatcccgtggccaggacgagcgagccgagaccctcaagcgcttggaggagctc
cagggtgccgtcggtcgcattcagggtgcgttgacgctgaaagagaaggagagcggcaat
ttacgagcgcagcttcagggtttgcaagcctcgctggagtgtcgagaacgccaagcggag
gaattgagacggaggctgcaggaggagcgtgacgagatcgagcgcagatgtaccgataga
gatagccagaatgaaacgctggaagttcaactgctggacttacgaaaaaccctaaaaagc
agagagagggaactttctgttagctccgagagaatcaagtatttggaagaacatctggag
aaggtaaacaaggagaaagagagtttgagttttagactcggggacatcgatctgaatgcc
agcgtagaaaccggaaagcttgataactgcaaatctcagttgactgcgctactgcaagcg
gtcaaaaagagtgaggacagcgtcgtagagctgactcagggaagggaagctttgttagac
cagctcgccgttctgagggcttctgagaagcacctaaagggaaggctggaagctgcccat
ttatgcacggaagaccgcgagaagaagtttctggatgaaaactgccatttggaggagctt
gtccagaaggctcttcttgagaaacagcgattggaagctcaacagaagagtgtggaacag
gaaaatttggacctccttgaagttcagtcctcattgaaaaaacaactcactgaggcccaa
gaggaggtggacctgcttaacgctaaagtgtccaacctggatgagaacctcacgggatca
caaaagagccatgcggagctgctgatgaaattccagcaaatggaagtcaagctcaaagac
cagacagctaaatgtggtctcctacaggaacgtgttgaggaactggaaagcagggcctca
gagcaacatgatgaaaaaggagcggcggagagcaacgaaaaaacaccaaagctccacgag
gaacatttaacccctgatagcaaagaggctccgttcaggctggtgattgctgaggctcaa
ctggagctcaaccttcgggaggtgcatcgacttagggaggaggtggtggagctcagggct
caactcctggctgggacggaggagaagatgaaagctcaggcctttcaggaggtgaccgaa
gcgtccagagaggacctgcgagttttggtggaacagctcaagggtcaagtggaggagctg
aaccggcgacacgtcgatgagatcctgcgttctcgtgagcgtgaggaagcgctgatccgg
gaacgagactgcgaggccctagctcgggcaggcctggccgccgaggtgacggctaacaag
gaggagctgcacactctcaagcaacgctacgatgccttgtgcctggagaacagtgagtcc
ggggaggccctgcaccgagccaacaccgaaaccgccgagctcggagttcgagtgtgcacg
ctgacggccgagaacgaagaagctcgtctgcgattggagaccctctccgagaggcagcaa
gcgctggaggaggaggccaccaggatggatgcttgcacggagcagctccgccgggagaat
cagcaactcgtcggcaagctccgtcaccaggatgacctttgggccatgacgcagaagctg
caagaggagctgaccaaagtccaagaggaggcagaggcgctgcaggagaagagccgccaa
gagatggaagcgctccggctggagctcagcagccaggccatcagtcacagcagtcaactg
cagagtgtcaacgaagagttgatggatgagaggttgcagatgatgagcgagcaggagaaa
gcagtcgaagtagaaaagcaactcaagcgctggaagactgaggtccaacgataccggcaa
cacctcgccgagaaaaccattcagatggcccagtcggaaaatctccttcagcagaaagag
gacgagcttatccaactaagaaagaatttatcaagatgccaggaggagcttgacatgact
cagaaggcctgtcaggagctgagggacactctgaggaaggtcacgctggacaagcagaac
ttagatctgaggacggcggccgaactggacgacctctaccgcaccaaggtcaacctggag
gaaaggctggtggagctcatcagggacaaagatgcgctgtggcagaagacggacgcgctg
gagtttgagcagaaactgcgcgacgaggaaacggagcgtgacgtcaactactgcttgggc
tgccgcacgccgttcggctggttgctccgcaagcacagctgcagatcttgtggccgtccc
ttctgccattattgcctggccaatgcagctagttaccagatgggcggtaccagagagctc
tgctgccgggattgccgtaaccaggtcagtggagaggaagagcgccccccacaggaggac
accgttaccagcacgccaggctctgcgttcggccgactgctgcagcctctgagagccgtg
acgagcctcttgggagtggatgaaggcgacaatcaggaggatggaatatttgacatcatc
acagaggatgaagtgagcggcatctccgacggtgactcgtttgtcaccgcctgctcttct
ggacatggacagcaggaggcagcacaattaagctgcagcagtgccagcacaggagacttg
tcgtcggaggtcctcgaggatcagcgtggcgccatgcaggatgcagagatctgcctgctc
aagtcaggagaactgacgttgacgtcttgcttcggattggacgacatatcgagttttggc
gacagctcgagggagctcttcatcaagtccaactgttacagcactgtgcccatcagcgcc
ggctggtcgggcgccaccgtctgctggacgtttacctcagaacccaaaggcatttccttc
agtgttgttttccaggagagtgcacacacgacattggagcaggccaaggtcttgatccca
ctgactcgctgcaactcccataaggagacaataaggggagaaatgaaagttcgaaaagca
ggagaatacatactcatctttgataactccttttcgaggttcatctccaagcgggtgatg
tatcatctggctgtggatgcgggtggcctcccttga
DBGET
integrated database retrieval system
