Syngnathus scovelli (Gulf pipefish): 125985110
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Entry
125985110 CDS
T08785
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04514
Cell adhesion molecules
sscv04520
Adherens junction
sscv04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125985110
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
125985110
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
125985110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
ig
Interfer-bind
CRLF2-like_D2
PTP-SAK
Tc-R-P
V-set
DSPc
C2-set_2
Y_phosphatase3
PTPlike_phytase
Ig_C17orf99
PTP-NADK
Fn3_PTPRU
ICAM_N
Fn3_ELFN
Motif
Other DBs
NCBI-GeneID:
125985110
NCBI-ProteinID:
XP_049603589
LinkDB
All DBs
Position
17:8694938..8809578
Genome browser
AA seq
1921 aa
AA seq
DB search
MAPPTRRGACLVLPLLFSCTVISSVAEYMPSFIKSPEDQTGISGGVASFVCQAVGEPKPR
ITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTAANSVGEINTSAKLT
VFEENQIPHGFPTIDLGPQLKVVERTRTATMLCAASGNPDPEITWFKDMLPVDISSTNGR
IKQFQSGGTPIRGALQIENSDESDQGKYECIATNSAGTRYSAPANLYVRVRRVPPRFSIP
PTNQEVMPGGSVNLTCVAVGSPMPYVKWMMGLKELTREEEMPLGRNVHEVTNIRESGNYT
CVAMSSLGMIEATAQVTVKALPKPPVSLTVTERTATSVTLTWDSGNPEPVSYYMIQYRAK
ASTNGFQEVEGVATTRYSIGGLSPYSEYEFRIMAVNNIGRGAPSEPVSTRTGEQAPSSPP
LRVQARMLSATTMLVQWDPPEEPNGHIRGFRIYYSSDHTAPLSAWHKHNTDDSSLTTISG
LTPDITYSLRVLGFTSVGDGPPSEVLQVKTQQGVPSQPSGFTAETELDTCVLLSWLWPLQ
DPIIKYELQYWEDGTDNKIHVTFDPAGSYTVDGLKPDTVYRFSLAARSEMGLGVYTQAIE
ARTAQSTPSAPPQDVHLVSLSSTSLKVSWAAPPAGRRHGVIVSYTVSYQALSGEDTERHE
VSGIGAAASIYVIQDLERWTEYQVWVRAHTKAGPGPESAPVRMKTQPDVPGAPPRKMEAE
AVNSTAIRVTWKPPLQSKQHGQIRGYQVAYTLVENGEPRGQPNILDVVLAEEQFNITEFT
EHEAVITGLKSETTYSIAVAAYTTRGDGPRCKPKLVTTTGAVPGKPTMMISATMGNTALV
QWQPPKEMVGELMGYQLQYKRTDDDTYTSRELRSADDHYTVTGLHKGATYIFRLSARNRA
GVGEAYTKEIGTPEDVPSGFPLNLQVTGLTQSSTQLTWDPPLLAERNGKIVYYVVVYRDI
NSQQNSTNRTADTRMTIGGLNPDTTYDIRVQAFTSKGAGPLSPSIQSRTMSNDFPTLNFG
VKAVMKTSVLLTWDLPPNYKSQVPFKILYNQQSVEVQGNLKRKLITQLQPDTNYSFVLIS
RGNIAGGLQQQVSIRTAPDLIKTKPSYTAHQAQGGKMAINLPKVQTTTRVRWYYIVVLPV
SQSGRRWKNPDEMDLVEVNLDELLKSSEGPALRRRRHLDSSKPYIAAKLAALPPTFTLGD
EKRYNGFYNKPLTSGQEYVCFVLAVLRYEGTDSASNYMTFSASPYSDLIQVTSQSLVQGA
EQTEMLWVLGPVFAVVLIISIVIAILLFKKKRASPLPKDEHSGGVKDSLLPNTSDPVEMR
RLNYQTPGPSSHRSPNTPRMREHPPIPVASLADHIELLKANDGLRFSQEYESIDPSQQFT
WENSNMEVNKPKNRYANVIAYDHSRVVLTSVDAVPGSDYVNANYIDGYRKQNAYIATQGP
LPETLSDFWRMVWEQRSSTIVMMTRLEEKSRVKCDQYWPARGTETYGMIQVTMLDTVELA
TYSVRTFALYKNGSNEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKASNPLDAGPMVV
HCSAGVGRTGCFIVIDAMLERMKHEKSVDIYGHVTCMRAQRNYMVQTEDQYIFIHEALLE
AATCGNTEVAARSLYMHIQKLTQPPPGETVTAMELEFKRLANSKAHTSRFISANLPCNKF
KNRLVNIMPFESTRVCLQPIRGVEGSDYINASCIDGYRQQKAYLATQGPLAETTEDFWRM
LWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTD
ARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRT
GVFITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYA
T
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccccacacgcagaggggcgtgtctcgtcctgcccctgctcttcagctgcacc
gtgatctcctctgtggcagaatacatgccaagcttcatcaaatcccccgaagaccaaacg
ggcatctcgggcggcgttgcgtcctttgtgtgccaggcggtcggcgagcccaaacccaga
atcacctggatgaaaaaaggcaagaaagtcagctcgcagcgctttgaggtgatcgaattt
gacgacggctcggggtctgtgctacgcatacagccgctgcgcacgcaccgcgacgaggcc
atttatgagtgcacggcggccaacagcgtcggcgagatcaataccagcgccaagctgacc
gtgtttgaagagaaccagatcccccacggcttccccaccatcgacttgggcccccagctg
aaggtggtggagcggaccaggacggccaccatgttgtgcgcggccagcggaaaccccgac
ccggagatcacctggttcaaggacatgctgcctgtggatatcagcagcaccaacggtcgc
atcaaacagttccaatcaggcggtacgccaattagaggagctctgcaaattgagaacagc
gacgagtccgaccagggcaaatacgaatgcatcgccaccaacagtgccggcacccgttac
tcagctcccgccaacctctacgtacgagtacgcagagtcccgcccaggttctccatcccg
cccaccaaccaggaagtgatgccgggcggtagcgtcaacctaacgtgcgtagcggtgggc
tcgcctatgccttacgtcaagtggatgatgggcttgaaggagctgactcgtgaggaggag
atgcccttgggacgaaacgtgcacgaggtcaccaacatccgcgagtcgggcaactacacc
tgcgtggccatgtcctcgctgggtatgatcgaagccacggcgcaggtcaccgtcaaagct
ttgccaaagccccccgtttctctcacggtgactgagaggacggccaccagcgtgacgctg
acgtgggactcgggaaatcccgaacccgtgtcctactacatgatccagtaccgcgccaag
gcgtcgaccaatggctttcaggaggtggaaggcgtcgccaccacccgctacagcatcggc
ggcctcagcccctactcagaatacgagttccgcatcatggcggtcaacaacatcggccgc
ggggcacctagcgagccggtgtcgacgcgcacgggcgagcaagccccgtcgtcgcccccg
ctgcgtgtccaagcccggatgctgagcgccaccacgatgcttgtccagtgggacccgccc
gaagaacccaacgggcacattcggggcttccgcatctactacagctcggaccacacggcg
ccgctcagcgcctggcacaagcacaacacggacgacagcagcctgaccaccatctccggg
ctgacgccagacatcacctacagcctaagggtgctgggcttcacctccgtgggggacggc
ccgccctccgaggtccttcaggtcaaaacccagcagggagtcccgtcccagccgtcgggc
ttcacggctgaaacggagctggacacttgcgtcttgctgtcgtggttgtggcccctccaa
gaccccatcatcaagtacgagctgcagtactgggaggacggcacggacaacaagatacac
gtgaccttcgatccggccggctcttacaccgtggacggcctcaagcccgacacggtctac
cgcttctccctggcggcccgctccgaaatgggcttaggcgtctacacccaggccatcgag
gcccgcaccgcccagtccaccccctcggctcccccccaagacgtgcacctggtcagcctc
agctccaccagcctcaaggtgagttgggcggccccgccggccggccgccgccacggcgtc
atcgtgagctacacggtcagctaccaagcgctgagcggcgaggacacagagcgccacgag
gtgagcggcatcggcgccgccgcctcaatctacgtcatccaggacctggagcgctggact
gagtatcaggtgtgggtgcgcgctcacaccaaagcggggccgggccccgagagcgccccg
gtgaggatgaaaacccaaccggatgtgccaggagcgccgccccggaagatggaggccgag
gcggtcaactccaccgccatccgcgtgacctggaaaccgccgctgcagagcaagcagcac
ggccagatccgaggctaccaggtggcctacacgctggtggagaacggcgagccgcgcggg
cagcccaacatccttgacgtggtcttggcggaggagcagttcaatattacggagttcacc
gagcatgaggccgtcattaccggactgaaatctgagaccacctactccatcgctgtggcg
gcgtacaccaccaggggagacggacctcgttgcaaacccaaattggtcaccaccactgga
gcagtgcccggcaagcccaccatgatgatcagtgccaccatgggcaacacggcgcttgtc
caatggcagccccctaaagagatggttggcgagctgatgggttaccagctgcagtataag
cgcaccgacgacgacacgtacacgtcacgcgagctgcgcagcgccgacgaccactacacg
gtgacggggctgcacaagggcgccacctacatcttccgcctcagcgcccgcaatcgcgcc
ggcgttggcgaagcctacaccaaggagatcggcacccccgaggacgtgccctcgggcttc
ccgttgaacctgcaggtgacgggcctgacccagtccagcacccagctgacgtgggacccg
ccgctgttggccgagaggaacggcaagatcgtttactacgtggtggtttaccgggacatc
aacagccagcagaacagcaccaatcgcacagccgacacgcgcatgaccatcgggggcctg
aacccggacaccacctacgacatccgcgtgcaggcgttcaccagcaagggtgcggggccc
ctgagccccagcatccagagcaggaccatgtccaacgattttcccaccttgaacttcggc
gtcaaagcagtcatgaagacgtcagtgctcctcacctgggatttgccacccaactacaag
tcccaagtgccttttaagatcctgtacaaccagcagagtgtggaggtgcagggcaacctg
aagcgcaagttgatcacacagctgcagcccgacaccaactactcatttgtgctaatcagc
cgcggcaacattgccggtggtctgcagcagcaggtgtccatccgcaccgctcccgacctt
atcaagaccaagccctcgtacaccgcccatcaggcgcagggtggcaaaatggccattaac
ttgcccaaagtgcagaccaccacgcgtgtcagatggtactacattgtcgttctgcccgta
tcccagtcgggccggcgctggaagaatccggatgagatggacctggttgaggtgaacctg
gatgagctgctgaaatcgagcgaaggccccgcactgaggcggcggcgtcacctggactcg
tccaaaccgtacattgccgccaagctggccgcgctgccgcccaccttcacgctgggtgac
gagaagcgctacaacggcttctacaacaaaccgctgaccagcgggcaggaatatgtttgc
ttcgtgctggccgtcctgcgatacgaaggcactgacagcgcctccaattacatgacgttt
tccgccagtccttattcggacctcatccaggtcacatcgcagtcgctggttcagggggcg
gagcagacagaaatgctgtgggtgctgggccctgtgtttgccgtggtgctcatcatcagt
atcgtcatagccatcctgctctttaagaagaagcgagcgtcgcccctgcccaaggacgaa
cactcgggcggcgtgaaggactccctgctgcccaacacctccgaccccgtggagatgaga
cggctcaactaccagacgccagggcccagctctcaccgcagccccaacacgccaaggatg
agagagcacccgcccattcccgtcgccagcctggctgaccacatcgagctcctcaaggcc
aatgacggcctgcgcttctcccaggagtatgagtccatcgatcccagccagcagttcacg
tgggagaactccaacatggaagtgaacaagccaaagaaccgctacgccaacgttatcgcc
tacgaccactccagggtggtgctcacgtccgttgacgcagtcccaggtagcgactacgtt
aacgccaattacattgacggctaccggaagcagaacgcctacattgccacgcagggaccg
ctgcccgagacgctcagcgacttctggaggatggtgtgggagcagcgctccagcaccatc
gtcatgatgacgcgactggaagagaagtccagggtgaagtgtgaccagtactggccggcg
cgaggaaccgagacctacggcatgatccaggtcaccatgttggacacggtggaattggcc
acttacagcgtccgcacttttgcactctacaagaatggttctaatgagaagagagagctg
cggcagtttcagttcatggcctggcctgaccacggcgtgcccgagtatcccacccccatc
ctggccttcctgagacgcgtcaaggcctccaatcctctagacgcgggacccatggtggtg
cactgcagcgcgggcgtgggccggaccggctgcttcattgtgatcgacgccatgctggag
cgcatgaagcacgagaagtcggtggacatctacggccacgtgacttgcatgcgggcccag
cgcaactacatggtgcagaccgaggaccagtacatcttcatccatgaggcgctgctggag
gcggccacctgcgggaacaccgaggtggcggcgcgcagcctttacatgcacatccagaag
ctgacgcagccgccgcccggcgagacggtcaccgccatggagctggagttcaagcggctg
gccaactccaaggcgcacacgtcgcgcttcatcagcgccaacctgccgtgcaacaagttc
aagaaccgcctggtgaacatcatgcctttcgagtccacgcgcgtctgccttcagcccatc
cgcggtgtggagggctccgactacatcaacgccagctgcatcgacggatacagacagcag
aaggcctacctggccacgcaaggtccgctggccgagaccacagaggacttctggagaatg
ttgtgggagcacaactccaccattgtcgtcatgctgaccaagctacgggaaatgggacgg
gaaaagtgccatcagtactggccggccgagcgctcggcccgctaccagtactttgtggtg
gaccccatggccgagtacaacatgccgcagtacatcctgagagaattcaaggtgacggac
gcccgcgacggacagtcccgaaccatccgccagttccagttcaccgactggcccgagcaa
ggcgtgcccaagaccggggagggcttcatcgactttatcgggcaagtgcacaagaccaag
gagcagtttggacaggacggacccatcactgtgcactgcagcgccggcgtgggccgaacc
ggagtcttcatcactctgagcatcgtgctggagaggatgcggtacgagggcgtggttgac
cttttccagaccgtcaagacccttcgcacccagcggcccgccatggtgcagaccgaggac
cagtaccagctgtgctaccgggccgctctggagtacttgggaagcttcgaccactatgca
acgtaa
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