Syngnathus scovelli (Gulf pipefish): 125985333
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Entry
125985333 CDS
T08785
Symbol
mtf2
Name
(RefSeq) metal-response element-binding transcription factor 2 isoform X1
KO
K11485
metal regulatory transcription factor 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125985333 (mtf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125985333 (mtf2)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125985333 (mtf2)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
125985333 (mtf2)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
125985333 (mtf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mtf2_C
Tudor_2
PHD
Prok-RING_1
SMN_Tudor
PHD_ash2p_like
ASH2L-like_WH
SGF29_Tudor
FAM86
DUF4537
Motif
Other DBs
NCBI-GeneID:
125985333
NCBI-ProteinID:
XP_049604038
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Position
17:complement(4395303..4400520)
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AA seq
580 aa
AA seq
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MRDSGVLSHLSVRQRSHSSRQQAVPLSPTSQERVAYGEQDRFSEGQDVLARWSDGLIYLG
TIAKIDRDKQRCFVVFEDRSKSWVLWKDIQTGDEDEDDDEFDDIVCSICRHETSEEPNEI
VICDKCGQGYHQLCHSPIIDAAVIDSDDKWLCCECQLTSFPKQEETETMDLSFPYAPEEL
VWDEDHRTNLQQCYCYCGGPGNWYLKMLQCNSCEQWFHEACLRCLPMPMLYGDRFYLFIC
SVCNSGPEYLSRLPLGWEDVTHLSLYNLTMIHKKKYFDSELDLMAYINNNWELLQLGELA
DTPRSTRFAYVLEALNSNTTKFMSGKEVKKKKHLFGLRVRFPPTPPSGDHPVSRLMGRPS
HGINSNKSLSGMRAQKKSKKRKQATHSLEQQAKRRCSSELLSQELRKPTALESPSLDHFS
SVKSERSFLSSQTSDAESIGALSTSETTSSLSRPSSLCSSNRTQMTTSTVLLSPPLLKRK
RGRPRLVPPPHNPENLPLGQAHPIPSGADVATPLPGLHSADIVHGMDPNSQLSHLKSSIS
TYFGAAGRLACGEKFKVLARRVTFDGKVEYLLQWEGVTAS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagagactcgggcgttctgagtcatctgtccgtccgtcagcgatcccactcctcacgg
cagcaggctgttcccttgtcccccacgagccaagaaagggtggcttatggagaacaggac
aggttcagcgagggacaggatgtcttggcccgctggtcagatggtttgatctacttggga
acaatcgctaagatagatcgagacaagcagcgatgctttgtggtgtttgaggatcgatcc
aaatcttgggttctctggaaagatattcaaacaggagacgaagatgaagacgatgacgag
ttcgatgacatcgtgtgctccatatgtcggcatgaaacctccgaggagcccaatgagata
gtcatttgtgacaagtgtgggcaaggctaccatcagctgtgccactcgcccatcattgat
gctgctgtcatcgactcggacgacaaatggctttgctgtgaatgtcagctcacttctttc
ccaaagcaggaggagacagaaaccatggatctgtccttcccatacgcaccggaagaactg
gtgtgggatgaagaccaccggaccaacttacaacagtgctactgctactgtggagggcca
ggaaactggtacctgaagatgctgcagtgcaatagttgtgagcagtggttccacgaagcc
tgcctccgttgcttacccatgccgatgctttacggagacagattttatcttttcatttgt
tccgtttgcaacagtggacctgagtatctgagccgactgcctcttggatgggaggatgtg
acacacctgagcctgtacaacctgacaatgatccacaagaagaagtactttgattccgag
ctggacctgatggcctacatcaacaacaactgggagctgctgcagcttggtgaacttgcc
gacactccaagatcaacgcgttttgcgtatgttcttgaggctttaaacagcaacacaacc
aagttcatgtcaggaaaagaggtaaagaagaagaagcacttgtttgggctgagggttcga
ttccctcccactccccccagtggagaccatccagtaagcagactgatggggcgcccctcg
catggcatcaactcaaacaaatcgctgtctggcatgagagcacagaagaagtccaaaaag
aggaagcaagcaactcattcactggagcagcaggccaaacgcagatgttccagtgaactc
ctgtcccaggaactaagaaagcccacagcactagaatctccctcactggatcacttttcg
tccgtcaagagcgagcggtcttttctgtcatctcaaacctcagatgcagagtcgattggc
gccctgagcacctcggaaactacctcaagcctctcgaggccgtccagcctgtgcagctcc
aacaggacccagatgacgacttccaccgtgctcctttcccctccactcttaaaaagaaaa
cgcgggcggccgcggctggtcccgccgccgcacaaccccgagaatcttccgctcggccaa
gcacaccccatcccttccggcgcagatgttgcaactccgcttccgggactgcactctgca
gacatcgttcacggcatggaccccaacagccagctgtcccacctcaagagctcaatcagc
acctatttcggtgcagcaggaaggctggcttgcggggagaagttcaaagtgctagctcga
agggtcacctttgacggcaaggtggagtatctgttgcagtgggagggcgtcaccgcctcc
tag
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