KEGG   Syngnathus scovelli (Gulf pipefish): 125985517
Entry
125985517         CDS       T08785                                 
Name
(RefSeq) nectin-4-like
  KO
K06593  poliovirus receptor-related 4
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
sscv04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    125985517
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    125985517
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:sscv04515]
    125985517
Cell adhesion molecules [BR:sscv04515]
 Immunoglobulin superfamily
  Nectin family
   125985517
SSDB
Motif
Pfam: Ig_3 Ig_2 V-set I-set ig C2-set_2 LST1 TMEM154 DUF6377 EphA2_TM LapA_dom DUF7237 Lectin_N EzrA PRIMA1 TRP FAM176 CR_prot_dom_plant
Other DBs
NCBI-GeneID: 125985517
NCBI-ProteinID: XP_068506560
LinkDB
Position
1:27810789..27817414
AA seq 581 aa
MTSWIRGLLLCLLVARISASGGEFVQRPPNDSIFSLAEKETVLPCRFRPGETELVVQVTW
YKETPEGWEQIITAHHIDGQTAFGAWSGQVRFNSSIPTEDSSLVVFSTDVSHEGRYKCHI
NSYPFGNFDQIVTLMVWTIPISSLEPVILVEGQSYRQAASCRSLARPPPQLSWDTELHGQ
SINRSWANGAVTTYFSLHPLRKMNGKKLDCLVWHPTLTTGPRRHQNKLVVHFPPDSEVTG
YNGDWYVGLEHAALTCTSGGNPKPQQFTWARDGEALPEGLTPHPNGTLEFRRPLSQSDSG
TYQCVAKNDVGVGVAEVEIIVSEFPLRQAMTETMTMVVVGVIAAALLLLMLVVIITVTCH
HKKKNKRLKRELTEKKEEISTLSWQASLRRINSVSTDARGATEESIPLRVEGTLSSLGEM
APSRESHSTIMGGRAGEGGGGAYDNLGRPVLLNSQKVRESFMDHDEQGTFLPCRVPTPLP
IKSTREQKEEWSRPGSSVRSLRHHSPDYTTPSTTDNDDEVDEGLGGPASREHPDDQESQR
SRSQVSEVHSQLTNSTKRFKPETGHTALSPHASLVHKAQIV
NT seq 1746 nt   +upstreamnt  +downstreamnt
atgacatcctggatcagaggactcttgttgtgtctcctggttgcccggatctctgcgagc
ggaggagaatttgtccagcggcccccgaacgactccatcttctccctggccgaaaaggag
acggtcctgccctgccgcttccggccgggagaaaccgagttggtggtgcaggtcacatgg
tacaaggagaccccagagggctgggagcagatcatcacggctcaccacattgacggccag
accgcttttggagcgtggtctggccaggtgcgatttaacagcagcatcccgaccgaggac
tcgtctttggtagtcttcagcacagatgtctcgcacgaggggcgctacaagtgtcacatc
aactcttacccgtttggaaacttcgaccaaattgtgaccctcatggtctggaccatcccg
atctcctccctggagcccgtgattctggtcgaggggcagtcataccggcaggcggcgtcg
tgccgctctttggcccgcccgccgccgcagctgtcatgggacactgagctacacggtcag
tctatcaaccgttcctgggccaacggggctgtcaccacctacttctccttgcaccctctg
agaaaaatgaacgggaagaaactggattgtctggtgtggcatccgactctcacaacgggc
ccacgcaggcaccaaaacaaactggtcgtacactttcctcccgattctgaggtgacgggc
tacaacggggactggtatgtgggcctggagcatgcagccctgacttgcacgagtggagga
aacccgaaaccgcagcagttcacctgggccagagatggtgaggctttacccgagggtttg
acccctcaccccaacggaaccctggagttcaggcggcccctcagccaatcagacagcggc
acctaccagtgcgtggcgaagaatgacgttggcgttggcgtggcggaggtggagattatc
gtgtcagagtttcccctgaggcaagcgatgacggagacgatgacgatggtcgtcgtgggt
gtgatagctgcggcgttgctcctcttgatgctggtcgtcatcatcaccgtcacctgtcac
cacaagaaaaagaacaagaggctcaagagggaactgaccgagaagaaggaggaaataagc
actctgtcttggcaagcttctttgaggaggatcaactcggtcagcacagatgccagagga
gcgacggaggagagcatcccgctgagggtggagggaaccttgtcgtccctcggggagatg
gcccccagtcgtgagagccattcgacgatcatgggtgggagggcaggagaagggggaggg
ggtgcgtacgacaatctgggtcggccggtcctactcaactcgcaaaaggtcagagagagc
ttcatggaccacgatgagcagggaacgttccttccttgtcgcgtgccgacaccgttgccc
atcaagtccaccagggagcaaaaggaggaatggtcaaggccagggagctccgtcaggtcc
ctgcgccaccattccccggactacaccactccctccacgacggacaacgacgacgaggtg
gatgagggcctcggggggcccgccagtcgggagcatcctgatgaccaggaaagccagagg
agccgctcgcaggtgtctgaggtgcatagccaactcacaaatagcaccaagaggttcaaa
ccggagacaggccacactgctttgagcccgcatgcctccctggtgcacaaggcccagatc
gtgtag

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