Syngnathus scovelli (Gulf pipefish): 125986189
Help
Entry
125986189 CDS
T08785
Symbol
flt1
Name
(RefSeq) vascular endothelial growth factor receptor 1 isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04020
Calcium signaling pathway
sscv04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125986189 (flt1)
04020 Calcium signaling pathway
125986189 (flt1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125986189 (flt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sscv01001
]
125986189 (flt1)
Enzymes [BR:
sscv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125986189 (flt1)
Protein kinases [BR:
sscv01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
125986189 (flt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Ig_2
Pkinase
VEGFR-1-like_Ig-like
ig
V-set
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
VEGFR-2_TMD
Ig_4
Ig_6
C1-set
Ig_5
C2-set_2
BARF1_ig2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
125986189
NCBI-ProteinID:
XP_049605652
LinkDB
All DBs
Position
18:complement(11794818..11811954)
Genome browser
AA seq
1225 aa
AA seq
DB search
MNFLLTFLLCGLYALFAKGADEEADGKYSVPVLEGTHRQLVLEINQTLELRCRGRWELSW
SFPPDLPHDQMRVEEFRCGRSQRLHCSRVTLLGGSQPRHTGSFLCRYRHRAQQQASVYVY
VTDSRQPFVEHSEMSPDVLYMKEKQPLVIPCRVTHPNITSALVKFPNRSLSPDQRNIVWN
SKRGFTIRSPTFYYIGLFFCQTLVDGVTHKSRIYIVHRPVSNILDVYLNSTGPVQALKGE
RLVLNCTATGELNTRVNISWDYPGKTSSSGSTSKRLLKHRTHMLFYNILTIPKLRRTDRG
LYTCRVSSGNKTKQQKVTVTVYDRPFIRLKPRRGSVIEARAGQKSYRISPKLRAFPAPQV
IWLKDGTVAAERCSRYLLDGHSLVIRDVAEEDAGKYTVRVRNQEHGLYQNLTLILVVNAS
PQIGEKAVSSRDSGAVPRGSRQSVHCTSHAVPAPHLHWLWHPCPPKGLCAAPTSSSVWIP
VSEGLPATSTHNRILSVSHRQEVLQGKTKTVGVATVARALVSGVFRCVASNSVGLDHLDI
PFYVTDVPGGFALSQGEDAREGGDLRLTCSANKHLYSSLSWRRLHPDRGGGTALSGQPST
GEFSRSLLLSLSNLSAQDSGAYMCTAHHRLTGQEAHLVAQVRVSALEPPELLKNLTDRTV
NVSSSVSLRCRAEGVPPPAVTWYKNQRALSAGSGIAMSAKEGSLHIERITVEDQGLYTCQ
ASNQKGSVESSAYIWVNAPETPSMEIPTLTCTCVVATFLWLLLTLLIRKLRQPDNSQSKT
EYLSIILDSGDGPVREQSERLQYDPNQWEFPRERLKLAGKNLGRGAFGKVVQASAFGMDN
ASSCTTVAVKMLKEGATVSEHKALMTELKILNYIGHHVNVVNLLGACTKPGGPLMVIVEY
CRHGNLSSFLRSKREMFGAARRKSGKKSCNIQREMNDDTNIGEDISDSPLFLEDLISFSF
QVARGMDFLASRKCIHRDLAARNVLLSDNNVVKICDFGLARDIYKDPDYVRKGDARLPLK
WMSPESIFDKVFTTQSDVWAFGVLLWEIFSLGASPYPGLHVDEDFCRRLKAGTRMRAPEY
STADIYSTMLACWEAEPSERPSFSHLADTLGDLLRSTDEKNWIPLGSRVEFWKSGEKPLA
VTNLSYMHAVVAKLDTFEEMPCEDPRHRSEDCDSGMVLPSEELQRLSWSKGIKEAVRLHS
NGSSRWDSDLGGSPPPDYNLFYPSF
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgaactttctgctcacctttctgctttgtggattgtacgcgctctttgccaaaggtgca
gacgaggaggcagacggcaaatacagcgtgcccgtgctggaagggacgcacagacagcta
gttctggagatcaaccagaccctggagctcagatgcagaggtcgctgggagctgtcgtgg
tccttcccgcctgacctgccccacgaccagatgcgcgtggaggaattccgctgcggcagg
tcacagcggctgcactgcagtcgcgtgacgctactgggtggctcccagccacgccacacg
ggctccttcctgtgccgctaccgacaccgagcgcagcagcaggcgtccgtttacgtgtac
gtgacagatagtcggcaaccatttgtggagcattcagagatgagccccgacgttttgtac
atgaaggagaagcagccgctggtcatcccctgcagggtcacccaccccaacatcaccagc
gcgctggtcaagttccccaaccgcagcttgagtcctgaccaaaggaacatcgtgtggaac
agcaagcggggcttcaccatccgctctcccactttctactacatcggcctcttcttctgc
cagaccctggtggacggcgtgacgcacaagtcgcgcatctacattgtccacagaccagtg
agcaacatcttggacgtgtacctcaacagtactggtcctgtgcaggccttgaagggagag
aggctggtgctcaactgcaccgccaccggggagctgaacaccagggtgaacatctcgtgg
gactaccctggaaagacgagcagcagcggctccacgtccaagcgtctgctgaaacacagg
acccacatgttgttctacaacatcctgaccatccccaaactgcggcgcaccgaccgcggc
ctctacacgtgtcgcgtcagcagcggaaacaaaaccaagcagcagaaagtcaccgttacc
gtttacgatcgccccttcatccgattgaagcccagacgaggctcggtaatagaggcccga
gcgggtcagaagtcctaccgaatttcacccaagctgcgagccttcccggcgccccaagtg
atctggttgaaagacggcacggtggcggccgagcggtgctcccgctacctcctggacggc
cactccctggtcatccgcgacgtggccgaggaagatgcgggcaaatataccgtgcgcgtc
cgcaaccaggagcacgggctctaccagaacctcacgctaatcctcgtggtcaacgcgagt
cctcagatcggcgagaaagccgtgtcgtcgcgggactcgggcgccgtaccccgggggagc
cgacagtccgtgcactgcacgtcccacgccgtcccggcgccgcacctccactggctctgg
cacccgtgtccgcccaaaggcctgtgcgcagctccgacatcctcctccgtgtggatcccc
gtgagcgaggggctccccgccacgtccacacacaaccgcatcctgagtgtgagccacaga
caggaagtgcttcaggggaagaccaagacggtgggtgttgcgaccgtggcccgggctctg
gtgtcaggtgtgttccgttgcgtggcctccaactctgtgggactggaccacctggacatc
cccttctatgtcacagacgttccaggaggcttcgccttgagccagggggaagacgccagg
gaaggcggagatctgcgcctcacctgcagcgccaacaagcacctgtacagcagcctgtcg
tggcgacgcttgcatcccgaccggggcgggggcaccgccctgagcgggcaaccgtccacg
ggagagttctcacgctctctgctgttgtcgctgagcaacctgagcgcgcaagactcgggc
gcctacatgtgcaccgcccaccaccgcttgacagggcaggaggcccacttggtggcgcag
gtgagggtctcagccctggagcctccagagctgctaaagaatttgacggatcgtacggta
aacgttagcagctcggtgagcctccgttgccgcgccgagggcgtcccgccacccgctgtc
acgtggtacaagaaccaacgcgctctgtcggcaggatctggtattgcgatgtcagctaag
gagggctcgctccatatcgagcgcatcaccgtggaggaccagggcttgtatacatgccag
gccagcaaccagaagggctctgtggagagctccgcctacatatgggtcaatgcgcccgaa
acgccgtccatggagattcctactctgacgtgcacgtgcgtggtggccaccttcctgtgg
cttctcctgacgctcctgatccgaaaactacgacagcccgacaattcccagagtaaaacc
gagtacctgtccatcatactggactctggagacggccccgtccgggagcagtccgaacga
ctccagtatgatcccaaccagtgggagttccctcgagagcgtctcaaattagcaggcaag
aatttgggccgaggagcctttggtaaagtggtgcaggcatctgcgtttggaatggacaac
gcttccagctgcacgacggttgctgttaaaatgctcaaagagggcgccacagtcagcgag
cacaaagccctgatgaccgaactgaaaatcctcaactacatcggacaccatgtcaacgtc
gtgaacctactgggagcttgcaccaagccgggagggccgctgatggtgattgtggagtac
tgtcgccatggaaacctgtccagcttcctgagaagcaaacgagagatgtttggggcggcc
agaagaaaatctggaaagaagagttgcaacatccagagagaaatgaatgatgacacaaac
attggcgaagacatatcagactcgccgttatttctggaggatctcatctccttcagcttc
caggtggcgcgaggaatggacttcctggcgtcgcgcaagtgcattcatcgagacctggca
gcccgaaatgttttactgtctgacaacaacgtggtaaagatttgcgactttggcctagcg
agggacatctacaaagaccccgattatgtgcgaaagggtgacgctcgcctgcctctcaag
tggatgtctccggagtccatcttcgacaaggtctttaccactcagagtgacgtgtgggcc
tttggtgtcctgctctgggaaatcttctctttgggggcctcaccgtatcccggcctgcac
gtcgacgaggacttctgtcgcagactgaaggcgggaaccaggatgagggcgccggagtac
agcacggccgacatttacagcaccatgctggcctgctgggaggccgagcccagcgagaga
ccttccttttcccacctggcggacaccctcggagatctgcttcgctccacggacgagaag
aattggattcctctgggatctcgggtggaattttggaagagcggagaaaagccccttgct
gtcactaacttaagttacatgcatgctgtggtggccaaactggacacatttgaggagatg
ccctgcgaggatccgcgtcacagatctgaggattgcgacagcggcatggtcctaccttca
gaggagctgcagcgtctttcctggagcaagggcatcaaggaagctgtccgtctccatagc
aacgggtcatccaggtgggattcggacctggggggctcccctcctcccgactacaaccta
ttttacccctccttctag
DBGET
integrated database retrieval system
