Syngnathus scovelli (Gulf pipefish): 125986289
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Entry
125986289 CDS
T08785
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125986289 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
sscv04050
]
125986289 (tnfrsf11a)
04090 CD molecules [BR:
sscv04090
]
125986289 (tnfrsf11a)
Cytokine receptors [BR:
sscv04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
125986289 (tnfrsf11a)
CD molecules [BR:
sscv04090
]
Proteins
125986289 (tnfrsf11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
125986289
NCBI-ProteinID:
XP_049605891
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All DBs
Position
18:complement(10622486..10633085)
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AA seq
643 aa
AA seq
DB search
MELNFPPRWIFPCWMACILLAYHAQNAASKSLQCGEQQYLKGTRCCNKCKPGLRVFSDCT
ESHQTKCVKCGHGEYQPYWTQETRCLQQRICDAGKGFMSRPENLEAEEPCRCLPNLQCSL
INCEFCEKIPSCRPGYGLEVEPESKNGRKICAPCKKGFFSADNNTKQCKQWTNCKAEGRS
ETRAGSAQADAVCGPPVSSAAPSWVIVSVLSAITILCLLILFLFCYKDKLKLLSFNLRSC
VQNLKRTRIQQETLAPLYQSGSAGGLKYIPCETTKLFCQAPHTKTGDEPPCTLLPSTPAA
AISLPQPQERTTNTNDGPQKETVTAGQSESSGGPEEVSEEEELTSVSPLLPGSCICSIQV
REPLEVGENEDCSQAVSPGTPWTCSCGGLYATKRPEEEKSPRVSNAHMVKSEKSIASLVS
FSPPLHRSSSVNPPSSSVPELCVPLSKARAKTEFKGHLKDMSTVKQKGYYRLESTDSSSA
ENSGPPVITSVSPLKTSSSTGDVYTEKPQEASNAEQGYGASWEDSRGKTLLSADTALECP
PGSLQSQPAEPTLTSGQVSGNHNTTFISSGQVVNFSGDVIVVYVGQTSLESDDAPLEDDF
SSPVQEQANETASFFQSSLRSVGDFVTQRPLRDDTKQAQKMTA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggaactaaactttcccccaaggtggatattcccatgctggatggcgtgcatcctgctt
gcctatcatgcacagaacgcagcctccaagtctcttcaatgtggcgaacagcagtactta
aagggcacaagatgctgcaataagtgtaaaccaggcttacgtgtcttttcagattgcact
gaatcccatcagaccaaatgtgtgaaatgtggtcatggggagtaccagccctactggacc
caagagacccgctgcctccagcagagaatatgtgatgcaggtaaaggttttatgtccagg
ccggaaaatctggaggcagaggagccttgtcgctgtcttcccaacctccagtgttctctc
atcaactgtgagttttgtgagaagatcccctcatgccgacccggatatggactcgaggtt
gaaccagaatctaaaaatggaaggaagatttgcgctccgtgtaagaaaggattcttttct
gcggacaacaacaccaaacaatgcaaacagtggactaattgtaaggcagagggcaggagt
gagacgcgagcaggcagcgctcaagccgatgctgtgtgtggaccaccagtctccagtgct
gccccatcctgggtgatagtgtcagtgttatcagccatcaccatcctttgtctcctcatc
ctcttcctcttttgttataaagacaaactcaagttactgtcttttaatctgcgatcatgt
gttcagaacctgaaaaggaccaggatacagcaggagactttggcccctctttaccaaagt
ggttcagcaggcggtctcaaatacatcccatgtgagacaaccaaactcttctgccaagcc
cctcacactaaaactggtgacgagcccccttgcaccttactcccctccactccagctgct
gccatctccctccctcagccccaggaaaggaccaccaatacgaatgacggccctcagaag
gagacagtgacagcgggacagagcgaaagttccggcggccctgaggaagtttccgaagaa
gaggaactcacaagcgtctctccgctgttgccgggttcctgcatatgcagcattcaggtc
cgggagcctctggaagttggggagaatgaggactgtagccaagctgtcagtccagggacc
ccttggacttgctcctgcggtggtctatatgcaacaaagagacccgaggaggagaagagt
ccaagagtcagcaacgcacacatggtcaagagtgaaaaaagcattgcctctcttgtctcc
ttttcaccacctctccatcgctcttcctcggtcaatcctccatcaagttcagttcctgag
ctttgtgtgcctttgagcaaggctagggcaaaaacagagttcaaaggtcacctgaaagac
atgtcaacagtaaagcagaagggatattacagactggaaagcacagattcctcatccgca
gagaacagtgggccccccgtgatcacctcagtcagccctttaaagacctcctcatcgact
ggagatgtctacacagaaaagcctcaggaggcctccaatgcggagcaaggctacggagcc
tcctgggaggacagcagaggaaaaacactcctgtcggcggacacagcgctcgagtgtccc
cctggaagcctgcagagtcagcctgcagaaccaactcttacctcaggtcaagtatcgggg
aatcacaatacgaccttcatctccagcggccaggtggtgaacttcagcggtgatgtcatc
gttgtttacgtgggtcagacgtctctcgaaagtgacgatgcgccgctggaagacgacttc
tcaagtcctgtccaagagcaggccaatgagaccgcatcgtttttccagagtagcctgagg
tcagtgggagactttgttacccagaggccattgcgggacgacacgaagcaggcccaaaaa
atgactgcgtga
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