Syngnathus scovelli (Gulf pipefish): 125986565
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Entry
125986565 CDS
T08785
Name
(RefSeq) H-2 class I histocompatibility antigen, K-Q alpha chain isoform X1
KO
K06751
MHC class I antigen
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
sscv04145
Phagosome
sscv04218
Cellular senescence
sscv04514
Cell adhesion molecules
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125986565
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125986565
04145 Phagosome
125986565
09143 Cell growth and death
04218 Cellular senescence
125986565
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125986565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125986565
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
125986565
Exosome [BR:
sscv04147
]
Exosomal proteins
Proteins found in most exosomes
125986565
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
Antigens
125986565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_3
Ig_3
TMEM154
EPTP
ig
Motif
Other DBs
NCBI-GeneID:
125986565
NCBI-ProteinID:
XP_049606194
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Position
19:6139658..6171312
Genome browser
AA seq
413 aa
AA seq
DB search
MLGMNLLAFFVAAVQIHRVTSVIHTLNYFTTVSQVAKLPEFLEVAYVDGVQILQFDSNHR
ETKAKHDWVNNITEDNPHFWETETAINIMNEQIMKDNIETAKKRFNQTGGVHMIQVMKGC
EWDDETDEVNGWEHYRYDGEDFLAFEAKTMTWIAAHPQVFTTKIKLDQIGGLNEVKKIMQ
TEVCPELLKKHLRNGRDFLTRTELPKVSLLQKTPCSPVTCHATGFYPRTSTLFWRKNGEE
IHEDVEMGETLPNHDGTFQTSAHLKVEVTPAAEREYECVFRLAGVSEDIVIKLDAGSILS
NQEQDWKNKVAIAVPLLVLNLVAMVMAVVVVPMILDKHLKRKNVIYSQACKEEKPKTKEE
EGQLSVGILSEDFLIAPHLEIQMFFFFKSTIIMFLSSFWMVLTSVDILMKVRE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcttggaatgaatttacttgcattctttgttgcggccgtgcaaattcaccgcgtgaca
tctgtcattcacacgctcaattatttcacaacggtgtctcaagttgcaaaactaccagag
ttcctggaggtggcgtatgtggacggcgttcagattctgcagtttgacagcaaccacagg
gaaacgaaagcaaaacatgactgggtgaacaacatcacagaagataatccgcacttctgg
gagacagagacagcgatcaatattatgaatgagcagatcatgaaggacaacattgaaacc
gctaaaaagcgcttcaaccaaactggaggtgttcacatgattcaggtgatgaaaggctgt
gaatgggacgatgagacggatgaggttaatggttgggagcactaccgttacgatggagaa
gacttcctagcatttgaggcgaagacgatgacatggatcgcagcacatccacaagttttc
accaccaaaatcaagttggaccaaattggtgggcttaatgaagtcaagaagattatgcag
actgaggtgtgtcctgagctgttgaagaagcatttgaggaacgggagggacttcctgacg
agaaccgagcttcccaaggtgtctctcctgcagaagacaccttgctctccggtcacctgc
cacgccaccggtttctaccccaggacatcgaccctcttttggaggaagaacggcgaggag
atccacgaggacgtggagatgggggagaccctccccaaccacgacggaaccttccagacc
tcggcccacttgaaagtggaggtgacgcccgccgcggagcgggagtacgaatgcgtgttc
cggctggccggcgtctcggaagacatcgtcatcaagctggacgccggaagcatcctgagc
aaccaggagcaagactggaagaataaggtggccatcgccgtcccgttgttggtcctcaat
ctggtggcgatggtcatggcggtggtagtggtgccgatgatccttgacaagcatctcaaa
agaaaaaatgtcatatactctcaagcttgtaaagaggaaaagccaaaaacaaaagaagaa
gaaggacaattaagtgttggaattctttcagaggactttctcatcgcaccgcatttggaa
atacagatgttttttttcttcaagtcaacaatcattatgtttctgtcaagtttctggatg
gttctaacatctgtagatattctcatgaaggttcgtgagtag
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integrated database retrieval system
