Syngnathus scovelli (Gulf pipefish): 125986568
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Entry
125986568 CDS
T08785
Name
(RefSeq) H-2 class I histocompatibility antigen, K-Q alpha chain-like isoform X2
KO
K06751
MHC class I antigen
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
sscv04145
Phagosome
sscv04218
Cellular senescence
sscv04514
Cell adhesion molecules
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125986568
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125986568
04145 Phagosome
125986568
09143 Cell growth and death
04218 Cellular senescence
125986568
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125986568
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125986568
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
125986568
Exosome [BR:
sscv04147
]
Exosomal proteins
Proteins found in most exosomes
125986568
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
Antigens
125986568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_3
ig
MHC_I_2
TMEM51
Motif
Other DBs
NCBI-GeneID:
125986568
NCBI-ProteinID:
XP_049606219
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Position
19:6133391..6151755
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AA seq
384 aa
AA seq
DB search
MLGKNLLGLFVAVVQIYSVTPVIHTLDYFMTASRNGTLPEYMEVVYVDDVQILQFDSNHR
KTNAKHDWVNKITIDYPYFWKREMDISYGTEQDMKNKIEIAKKHFNQTGGVHMIQLMYVC
EWDDETGEVDAWEQYCYDGEYFLSFEGKTMKWIAANLQAFSTKIKWDQIDGLNKTKKNVP
TEECPYYLKTHVRNGMDFLTRTELPKMFLLQKTPSSPVTCHATGFYPRTSSLFWRKNGEE
IHEDVEMGATLPNHDGTFQTSVHLKVEVTSAAEQEYECVFQLASGLEATVTKLDAGSILS
NARIQEEQDRKKARAIVIAWAVLVQMAVVMLILAECHKTRQAEYPEKQRESAISGEIACE
AKEAEYLGNATEGCFKLERVESVK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcttggaaagaatttacttggattatttgttgcggtcgtgcaaatatacagcgtgacg
cctgtcattcacacgctcgattatttcatgacggcttctcgaaatgggacgctaccagag
tacatggaggtggtgtatgttgacgacgttcagattctgcagtttgacagcaaccacagg
aaaacgaatgcgaaacatgactgggtgaacaaaatcacaatcgattatccatacttctgg
aagagagagatggacatcagttatgggactgagcaggacatgaaaaacaagattgaaatt
gctaaaaagcacttcaaccaaactggaggtgttcacatgattcagctaatgtacgtctgt
gagtgggatgatgagacgggtgaagttgatgcttgggagcaatactgttacgacggagaa
tacttcctatcatttgaggggaagacgatgaagtggatcgcagcaaatctacaagctttc
agtaccaaaatcaagtgggaccaaatagatgggcttaataaaaccaagaagaatgttcct
actgaggagtgtccttattatttgaagacgcatgtgagaaacgggatggactttctgacg
agaaccgagcttcccaagatgtttctcctgcagaagacgccttcctctccggtcacctgc
cacgccacgggtttctaccccaggacatcgtccctcttttggaggaagaacggcgaggag
atccatgaggacgtggagatgggggcaacactccccaatcacgatggaaccttccagacc
tcggtccacctgaaagtggaggtgacgtccgccgcggagcaggagtacgaatgcgtgttc
cagctagccagtggcctggaagccactgtcaccaagctggacgccggaagcatcctgagc
aacgcccgcatccaggaagagcaagacaggaagaaggcgagggccatcgtcattgcgtgg
gcggtccttgttcagatggccgtggtgatgttgatccttgccgagtgtcacaaaaccaga
caagccgaatatccagaaaaacaacgagaatcagcaatttctggagaaattgcgtgtgaa
gccaaagaagctgaatacttggggaatgctacagaaggatgtttcaagttggaacgggtt
gaatcggtcaaataa
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