Syngnathus scovelli (Gulf pipefish): 125986571
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Entry
125986571 CDS
T08785
Name
(RefSeq) H-2 class I histocompatibility antigen, K-K alpha chain isoform X1
KO
K06751
MHC class I antigen
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
sscv04145
Phagosome
sscv04218
Cellular senescence
sscv04514
Cell adhesion molecules
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125986571
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125986571
04145 Phagosome
125986571
09143 Cell growth and death
04218 Cellular senescence
125986571
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125986571
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125986571
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
125986571
Exosome [BR:
sscv04147
]
Exosomal proteins
Proteins found in most exosomes
125986571
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
Antigens
125986571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_3
ig
MHC_I_2
Motif
Other DBs
NCBI-GeneID:
125986571
NCBI-ProteinID:
XP_049606237
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All DBs
Position
19:6081461..6110018
Genome browser
AA seq
340 aa
AA seq
DB search
MHGKNLLGLFVAAVQIHSVTLVIHTLDYFMTASRNGTLPEYMEVVYVDDVQILQFDSTHR
KMKVKHDWVNKISEDDPHFWEKEMEISYATEQVMKNKIEIAKKHFNQTGGVHMIQLMYIC
EWDDETGEVDAWEQYCYDGEYFLSFEGKTMKWIAANLQAFSTKIKWDQIDGLDKTKKNVP
TEECPSYLKTHVRNGRDFLTRTELPKMFLLQKTPSSPVTCHATGFYPRTSSLFWRKNGEE
IHEDVEMGATLPNHDGTFQTSVHLKVEVTSAAEQEYECVFQLASGLEATVTKLDAGSILS
NARIQEEQDRKKAMAIVIAWAVLVQMAVVMLILAECHKTR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcatggaaagaatttacttggattatttgttgcggccgtgcaaatacacagcgtgacg
cttgtcattcacacgctcgattatttcatgacggcttctcgaaatgggacgctaccagag
tacatggaggtggtgtatgttgacgacgttcagattctgcagtttgacagcacccacagg
aaaatgaaagtgaaacatgactgggtgaacaaaatcagtgaagatgatcctcacttctgg
gagaaagagatggagatcagttatgcgactgagcaggtcatgaaaaacaagattgaaatt
gctaaaaagcacttcaaccaaactggaggtgttcacatgattcagctaatgtacatctgt
gaatgggatgatgagacgggtgaagttgatgcttgggagcaatactgttacgatggagaa
tacttcctatcatttgaggggaagacgatgaagtggatcgcagcaaatctacaagctttc
agtaccaaaatcaagtgggaccaaatagatgggcttgataaaaccaagaagaatgttcct
actgaggagtgtccttcttatttgaagacgcatgtgagaaacgggagggactttctgacg
agaaccgagcttcccaagatgtttctcctgcagaagacgccttcctctccggtcacctgc
cacgccacgggtttctaccccaggacatcgtccctcttttggaggaagaacggcgaggag
atccatgaggacgtggagatgggggcaacactccccaatcacgatggaaccttccagacc
tcggtccacctgaaagtggaggtgacgtccgccgcggagcaggagtacgaatgcgtgttc
cagctagccagtggcctggaagccactgtcaccaagctggacgccggaagcatcctgagc
aacgcccgcatccaggaagagcaagacaggaagaaggcgatggccatcgtcattgcgtgg
gcggtccttgttcagatggccgtggtgatgttgatccttgccgagtgtcacaaaaccaga
taa
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