Syngnathus scovelli (Gulf pipefish): 125986573
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Entry
125986573 CDS
T08785
Name
(RefSeq) H-2 class I histocompatibility antigen, K-K alpha chain-like
KO
K06751
MHC class I antigen
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
sscv04145
Phagosome
sscv04218
Cellular senescence
sscv04514
Cell adhesion molecules
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125986573
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125986573
04145 Phagosome
125986573
09143 Cell growth and death
04218 Cellular senescence
125986573
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125986573
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125986573
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
125986573
Exosome [BR:
sscv04147
]
Exosomal proteins
Proteins found in most exosomes
125986573
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
Antigens
125986573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
EPTP
Motif
Other DBs
NCBI-GeneID:
125986573
NCBI-ProteinID:
XP_049606239
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All DBs
Position
19:complement(5973930..5976434)
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AA seq
287 aa
AA seq
DB search
MLGMNLLALFAAAVQIHSVTPVIHTLNYFTTISQVAKLPEFLEVAYVDDVQILHFDSNHR
ETKAKHDWVNNITEDNPHFWEIETAINIQNEQIMKGNIETAKKRFNQTGGIHMIQVMKGC
EWDDETDEVNGWEHYHYDGEDFLAFEAKTMTWIAAHPQVFTTKIKLDQIGGLNEVKKVTH
TEVCPELLKTHLSNGRDFLTRTELPKVSLLQKTPSSPVTCHATGFYPRTSSLFWRRIGEE
IHEDVEMGATLPNHDRTFQTSVHLKVVVTLAAEQEYDCVFQLDGLPE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcttggaatgaatttacttgcattgtttgctgcggccgtgcaaattcacagcgtgacg
ccagtcattcacacactcaattatttcacgacgatctctcaagttgcaaaactaccagag
ttcttggaggtggcatatgttgatgacgttcagattctgcactttgacagcaaccacagg
gaaacgaaagcaaaacatgactgggtgaacaacatcacagaagataatccgcacttctgg
gagatagagacggcgatcaatattcagaatgagcagatcatgaagggcaacattgaaacc
gctaaaaagcgcttcaaccaaactggaggtattcacatgattcaggtgatgaaaggctgt
gaatgggacgatgagacggatgaggttaatggttgggagcactaccattacgatggagaa
gacttcctagcatttgaggcgaagacgatgacatggatcgcagcacatccacaagttttc
accaccaaaatcaagttggaccaaattggtggacttaatgaagtcaagaaggttacccac
actgaggtgtgtcctgagctgttgaagacacatttgagcaacgggagggacttcctaaca
agaaccgagcttcccaaggtgtctctcctgcagaagacgccttcttctccggtcacttgc
cacgccacgggtttctaccccaggacatcgtccctcttttggaggaggatcggcgaggag
atccacgaggacgttgagatgggggcgaccctccccaaccatgacagaaccttccagacc
tcggtccacctgaaagtggtggtgacgctcgccgcggagcaggagtatgactgcgtgttc
cagttggacggcctcccggaataa
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