Syngnathus scovelli (Gulf pipefish): 125986721
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Entry
125986721 CDS
T08785
Name
(RefSeq) focal adhesion kinase 1 isoform X1
KO
K05725
focal adhesion kinase 1 [EC:
2.7.10.2
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04012
ErbB signaling pathway
sscv04148
Efferocytosis
sscv04370
VEGF signaling pathway
sscv04510
Focal adhesion
sscv04517
IgSF CAM signaling
sscv04518
Integrin signaling
sscv04810
Regulation of actin cytoskeleton
sscv05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
125986721
04370 VEGF signaling pathway
125986721
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125986721
04518 Integrin signaling
125986721
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125986721
09144 Cellular community - eukaryotes
04510 Focal adhesion
125986721
09142 Cell motility
04810 Regulation of actin cytoskeleton
125986721
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125986721
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sscv01001
]
125986721
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125986721
Enzymes [BR:
sscv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.2 non-specific protein-tyrosine kinase
125986721
Protein kinases [BR:
sscv01001
]
Non-receptor tyrosine kinases
FAK family
125986721
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125986721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Focal_AT
Pkinase
FERM_C_FAK1
FERM_N_2
FERM_M
Kinase-like
Haspin_kinase
FERM_F2
Motif
Other DBs
NCBI-GeneID:
125986721
NCBI-ProteinID:
XP_049606510
LinkDB
All DBs
Position
19:complement(2036211..2058558)
Genome browser
AA seq
1151 aa
AA seq
DB search
MPLEVADLACSLSSPGTSCGVMRVCEAASCLSVLGGDGHCQRLTCVSMATSGCSPFPICW
GREYDRHLAAAVSAGKTMATPYVDPNLNHALLDGGAKSRLSAGGSDRAAAGSVDRVLKVC
HHFEPNTELSSWSSNIRYGDAADVRGIIQKILDIHKVRWTSCFGLRLSSSGQPRDQVHWL
HPDMGVSHVREKYEQARPNEEWRYELRIRYLPKNFLQQFTEDKPTLNYFYHQVKNDYMAQ
IGDQVEQDVALKLGCLEIRRVYKEMGGNALDKKSNYELLEKDVGLRRFFPKDLLDSVKAK
TLRKLIQQTFKQVANLNDEECILKFLEILAPIHRYDKECFKCALGSSWVIQVELAIGPEE
GISYLTDKGSTPTHLANFTQVQSIQYSAMEEKDRKGMLQVNVAGAAEPLTVTTASLTMAE
NLADLIDGYCRLISMETRSFIVRVQKEGERALPSLPKLSNHEKKLEAVKSGVRTISVSDP
TPSTPPKPAKARRFLLPFVFCSDSPPNEDLSGDETDDYAEIVDEEDTYTMPSMTYGIVEA
RDYEIQRDRIELGCCIGEGQFGDVHQGVYNIPDKPALAVAIKTCKNCTSDSVREKFLQEA
LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLATLILFAYQLST
ALAYLESKRFVHRDIAARNVLVSSIDCVMLGDFGLSRYMEDSSYYKASKGKLPIKWMAPE
SINFRRFTSASDVWMFGVCMWEILMYGIKPFQGVKNNDVIGRIENGERLAMPPQCPPTLY
SLMTKCWSYDPSKRPRFTELKTQLNTILEEEKVQQEERLRMEMRRQVTVTWDSGGSDEAP
PKPSRPGYPSPRSSEGYFSSPQHNHYQPTAHGVGGGFSATDSWNQHKPEHTAMWSANMED
TGCAGQALMEERLMMQQQQMEDDQRWLEQEESFMKAEPRNSRGSIEREDGTLQAPGGSQH
IYQPVGKPEHVAPPKKPPRPGAPAHLSNLSVLGPVDSYNEGVKLQPQEISPPPTANLDRS
NDKVYENVTALVKSVIEMSNRIQPAAPEEYVPMVKEVGLALRTLLATVDETIPVLPASTH
REIEMAQKLLNSDLAELIAKMKLAQQYVMTSLQKDYKKQMLMAAHALAVDAKNLLDVIDQ
ARLKMITRTHS
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggaagtggcggatctcgcatgctcgctttcatcgcccgggacaagttgcggc
gtcatgcgtgtttgtgaggccgccagctgcctgtctgtgctcggcggtgacggacactgc
cagagactgacatgtgtttccatggcgacgagcggctgtagcccctttcccatatgttgg
ggccgagaatatgacagacacttagccgcggcggtgtcagcagggaagaccatggcgacg
ccctacgtggatcccaacctcaatcacgccctgctggacggtggcgccaagtcgcggctc
agcgccggggggtcggaccgtgccgccgccggatcggtggacagggtcctcaaggtctgc
catcactttgagcccaacacagaactcagcagctggtcctccaacatccgatacggggat
gctgctgatgtccggggaatcatccagaagatccttgacatccacaaggtgcggtggacg
tcatgcttcggcctgcgtctaagcagcagcggccaacccagagaccaagtgcactggctt
caccccgacatgggcgtgtcgcacgtccgtgagaaatacgaacaggcgcgccccaatgag
gagtggaggtatgaacttaggatccgatacctccccaaaaacttcctgcagcagtttacg
gaagacaaaccgaccctcaattacttctaccaccaggtgaaaaatgactacatggcacag
atcggggatcaagtggagcaagatgtcgcccttaaacttggatgcctggaaatcaggagg
gtctataaagagatgggaggaaacgccctggacaagaagtccaactatgagctgctggag
aaggatgtcggtttgaggcgatttttccccaaagatctgctggactcagtcaaggccaag
acgctacgtaaactgatccagcagacgttcaagcaggtggccaacctcaatgatgaggag
tgcatcctcaagttcctcgagatcctggcacccatccaccgctatgacaaggagtgcttc
aaatgcgcccttgggtcaagctgggtgatccaggtggagcttgcaatcggacctgaggaa
ggcatcagctacctgacagacaagggctcgacgccaacccatctggctaacttcacccaa
gtgcagtccatccagtactcggccatggaggagaaggaccggaaaggaatgctacaagtc
aatgtcgcaggagccgctgagcctctcaccgtcacgaccgcctcgctgaccatggcggag
aatttggccgacctgattgacggctactgtcggctcatctccatggaaacgcgctctttc
attgtcagagtacagaaagagggggagagagcgctaccttcccttccaaagttgtctaat
catgagaagaagttggaggcggtcaagagcggagtgagaaccatctcggtttcagacccg
acgccgtcgactcctcccaagccagccaaggcgcggcgtttcctcctcccctttgtcttc
tgttctgattcaccacccaatgaagatcttagtggggatgagaccgatgactacgccgaa
atagtggacgaagaggacacgtacacgatgccctccatgacctatggaatagtggaagca
cgggactacgagatccagagggaccggatcgagctcggttgctgcataggagagggtcag
tttggagatgtgcaccaaggagtctacaacatcccggacaagccagcgttggccgtcgcc
atcaagacgtgcaagaactgcacttcggacagcgtcagggaaaagttcctgcaagaagcc
ctgactatgcggcagtttgaccaccctcacatcgtcaagctgattggcgtgatcacagag
aacccggtgtggatcatcatggagctgtgcacgcttggagagctgcgttccttcctccag
gtgaggaagtacagcctggacttggcaacactcatcctgtttgcctaccagctcagcact
gcgctggcgtatctggagagcaaacgctttgtgcacagggacatagcggcgcgtaacgtg
ttggtgtcttcaatcgactgtgtgatgctgggggactttggtctgtcccgctacatggag
gacagctcctactacaaagcctccaaagggaaactccctatcaaatggatggctcctgag
tcaatcaacttcagaagattcacctccgctagtgatgtctggatgtttggcgtctgcatg
tgggagatcctgatgtacggcatcaagcccttccaaggggtgaagaacaacgacgtgatc
ggccgcatcgagaacggcgagcggctggccatgccgccccagtgcccgcccaccctttac
agcctcatgaccaaatgctggtcgtacgacccgagcaagcggccgcggttcaccgaactc
aaaacgcaactcaacaccatactggaggaggagaaggtgcagcaagaggagcggctgagg
atggagatgagaagacaagtcacagttacctgggactcgggaggttctgatgaggcgcca
ccaaagccgagtcggccgggctaccctagccctcgctccagtgagggctacttctcaagc
ccacaacacaaccactaccagccgacagcacacggcgtaggaggcggcttctctgccact
gattcttggaaccagcacaagccggaacatacagcgatgtggagcgccaacatggaggac
acggggtgtgcaggccaagcgctcatggaggagaggcttatgatgcagcagcagcagatg
gaggacgaccagcggtggttggagcaggaggagagcttcatgaaggctgagcccaggaac
agccgagggagcatcgaacgagaggacggcacgctccaggcgccgggtggaagccagcat
atctaccagcctgtgggtaaaccagaacacgtggctccaccaaagaagcctcctcggccc
ggagcccccgcccacctgagcaacctgtccgtcctcggccccgtcgatagctacaatgag
ggcgtgaagttacagccccaggagatcagcccgccccccacagccaacctggatcgctcc
aacgacaaagtgtacgaaaacgtgacggcgctggtcaagtcggttattgagatgtccaac
cggatccagccggcggcgcccgaggagtatgtgcccatggtcaaggaagtgggtctggcg
ttgagaactttgctggccactgtggatgagaccattcccgtactgcccgcaagcacccat
cgagagatcgagatggcccagaagctgctcaattctgacctggcagagctgatcgccaag
atgaagctggcgcagcagtacgttatgactagcttgcagaaggactacaaaaagcagatg
ctaatggcggcgcacgccctcgctgtggatgccaagaacctgctggatgtcatcgaccaa
gctcgtctcaagatgatcacgagaacacattcgtga
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integrated database retrieval system
