Syngnathus scovelli (Gulf pipefish): 125986952
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Entry
125986952 CDS
T08785
Symbol
egf
Name
(RefSeq) pro-epidermal growth factor isoform X1
KO
K04357
epidermal growth factor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04012
ErbB signaling pathway
sscv04020
Calcium signaling pathway
sscv04068
FoxO signaling pathway
sscv04510
Focal adhesion
sscv04518
Integrin signaling
sscv04540
Gap junction
sscv04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125986952 (egf)
04012 ErbB signaling pathway
125986952 (egf)
04068 FoxO signaling pathway
125986952 (egf)
04020 Calcium signaling pathway
125986952 (egf)
09133 Signaling molecules and interaction
04518 Integrin signaling
125986952 (egf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125986952 (egf)
04540 Gap junction
125986952 (egf)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125986952 (egf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sscv04052
]
125986952 (egf)
Cytokines and neuropeptides [BR:
sscv04052
]
Cytokines
Growth factors (RTK binding)
125986952 (egf)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
cEGF
LRP1-like_beta_prop
EGF_TGFA-like
EGF_CA
EGF_3
SGL
EGF_Epiregulin
EGF
Gurken_M
EGF_LRP2
GP46_beta
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
125986952
NCBI-ProteinID:
XP_049606877
LinkDB
All DBs
Position
1:14567653..14581208
Genome browser
AA seq
1053 aa
AA seq
DB search
MLAATFTAALIYLTVQNSGALALGTACWNERLTRAGRNGSCVVSQPFLIFGHGKAIHRMD
LDGKNQRRLVAGVASSILLDFHFREERIYWADKHAGIIYKTSVRGLQREKLYSSDKHISG
LAVDWIRNAVYWTSREKGKIKTMDTNGKSEKTLVRHLTQPSSIVIDPTKRFLFWLSGGMI
PSVHRCDVIGQVKVRLIKSSQQLKALSIDHRDRRLFWVQFGLQEESAIASSDYNGKALHI
IDQPLQSDSLRITLFYKHVYYTDAASRAIKRVNKYTGGEDFHVNLKQMAKVPVDIKVVHP
DKQPMADSPSLLQGCDEQSGNCINVCSSTAKQGVCKCSGGFALSKNGFYCEDVNECAHWN
HGCSLGCENTPGSYFCTCPNGYALLPDKKTCREIISCEGNTTECGHGCLATDEGPVCVCP
KGSVLNEDGQACTGCSSADKGGCSQLCIPISPTRWRCECLPGYQLHQDGKRCIASGSPPY
LLVATLVAVQTINSDGTEGQTLVDEPRGPIGSLDYDPVSNYVYFASTSQKIIERVHMNGG
SRQRLVTDGPDSSNGLAVDWIHRKIYWTVMRKSAVVSSTLDGFNVTTVVSSGLDKPTSIT
VHPLEKRLFWADIGHQPIVESCSLYGTNRTVIVNTSLVSPGGLTIDFADGRLYWCDGSRV
ETCALDGSKRRILLENQVGQPFDLAVFEDRLWMVDREHQQLMSVHKRTGKELQRLLGDLV
QPASLVVVHPLAKPNTARLDNKPVVETSLPDKALNDESTPQTPSNRTAVDSDFEAKTFTD
KMVSDERECYSAKPCGPNANCRLNAGSPACSCLDGFIGDGHMCVDSRKMPPSMTTSHPGN
SVESCPSTHESYCLYQGICFYFPEVESYACNCVAGYMGERCQFSDLEWWELQQTEEEKRR
NVVVASCVVLLICLLPIAACLIYCYRTRGLFRKQPSADNVSETSVADEDVLGIAKDGIHE
VSTAVNNDPKGTILPTTGCPRRAVCPSCSSETGDNQSEESETWSKRNQAYEYSMVSAAAM
EGNQISLHSSSQSPDPNLQTQLPNVKLAASCTV
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgttggccgcgacgttcacggcggcactaatttatctcacggtgcaaaatagcggtgcc
ttggccttgggcactgcatgctggaacgagaggttgacacgggcgggcagaaacggcagt
tgtgttgtttcgcagccttttctgatcttcggccatggtaaagccatacacagaatggac
ctggacgggaagaaccagagacgcctggtggctggggtggcatcttccatcctgcttgat
ttccatttccgtgaagaacgaatctactgggcagacaaacacgctggaatcatctacaag
acgtccgtgagaggcttgcaaagagagaaactttactcatctgacaaacacatctctggc
cttgcggtggactggattcggaatgccgtgtactggacgagcagggaaaagggcaaaatt
aagacgatggatacaaacggcaaaagtgaaaagactcttgtgaggcacttgacacagccc
agctcaattgtcatcgaccctactaaaaggtttttgttttggctgtctggtggaatgatc
ccaagcgtccatcggtgtgatgttataggacaagtgaaagtgaggctgattaaatcctcg
cagcagttgaaggcattgtccatcgaccacagagacagaagattgttctgggtacagttt
ggtctgcaagaagaaagtgccatcgcctcctcagactataacggcaaagccctacacatc
atagatcagccccttcagtccgattcgctgagaataacacttttctacaagcatgtgtat
tatactgacgctgcgtcccgagcaataaaaagagtcaacaagtacacgggcggcgaggac
tttcacgttaatttaaaacaaatggcaaaggtcccggttgatatcaaagtggttcatcct
gacaagcagccaatggctgactcgccatcactgcttcaaggatgtgatgaacagagtgga
aactgcatcaatgtgtgctcaagtacagctaagcagggagtttgtaagtgcagcggaggc
tttgctctcagtaagaatggcttctattgtgaagatgtgaatgaatgtgcccactggaac
catggctgctctcttggctgtgagaacaccccggggtcttatttctgcacttgtcccaat
ggatacgcccttctaccggataaaaaaacatgcagagagatcatatcctgtgaaggcaac
accaccgagtgtggtcatggttgcctagcaactgatgaggggcccgtgtgtgtttgtcca
aagggttctgtattaaacgaagatggacaagcttgtacaggatgctcctccgcagacaaa
ggaggctgtagtcagctatgcattcctatctcccctacaaggtggcgatgtgaatgcctg
cctggctaccagctccatcaagatggcaagcgctgcattgcctctggatcaccaccatat
ctgcttgttgccactctggtggctgtgcagacaataaacagtgatggcactgagggccaa
acccttgtggatgagcccagaggaccaattggatctttggactatgacccagtgtcaaac
tatgtgtactttgccagcacatctcagaaaatcatcgaacgggttcatatgaacggcggg
tccagacaacgccttgttaccgacggtccagactcgagtaatgggctggctgtcgactgg
atccatcgcaagatttactggactgttatgagaaagtcagcagtggtcagcagtaccttg
gatggattcaatgtgacaactgtagtaagcagtggactcgacaagccaacatccatcaca
gttcatcctctggaaaagaggttgttctgggcggatatcggacatcaacctatagtggaa
agctgctctttatatgggacgaaccgcacggtgatcgtgaataccagcctggtgtcaccc
ggaggtctgaccattgacttcgcagatggtcgtttgtactggtgtgacggaagcagggta
gagacgtgcgctctggacggttctaagcgacggatcttgctagagaaccaagtaggccaa
ccatttgacctagccgtgttcgaggacaggctatggatggtggatagggagcaccagcag
ctgatgagcgttcacaagcgaacggggaaggaactgcaacgtctccttggtgacctggtc
caacctgcgtcccttgtggtggtgcatccgcttgctaaaccaaatacagcaaggttagac
aacaagcccgtggttgagacatcactcccagacaaagcactcaacgatgaaagcacaccg
caaacgccatctaacagaactgccgtggactcggattttgaagcgaagacattcacagac
aaaatggtgtcagacgagcgggagtgttattcggcaaagccgtgcggtcccaacgccaat
tgtcgcctgaatgccggcagcccggcctgctcttgtctcgatggtttcatcggtgatgga
cacatgtgtgtggattcacgcaaaatgccaccatcgatgacgaccagccatcctggaaac
tctgttgagagttgcccctctacccatgagtcctactgcttgtaccagggaatctgcttc
tacttccctgaggtggagtcctacgcctgcaactgtgtggccggctacatgggcgagcgc
tgtcagttcagtgacttggaatggtgggagctgcagcagaccgaggaggagaagcgaagg
aacgtggtcgtcgcctcgtgcgtggtgctcctgatttgcctgcttcccatcgccgcctgt
ctcatctactgctacagaactcgaggactctttcgcaagcagccttcagcagataacgtg
agtgagaccagtgtggcagatgaagacgtgttggggattgcaaaagatggcatacatgag
gtgtccacggcggtaaataacgacccaaaaggaaccatcctcccgacaacgggttgtcct
aggagggcagtttgtccatcctgctcatcagaaacaggagacaaccagtccgaagaatct
gagacatggtccaaacgcaatcaggcgtacgagtattccatggtgtctgctgctgcgatg
gagggcaaccagatatccctccacagctcaagtcaatcgccagaccccaacctccagacg
caactcccaaatgtaaagttggctgcttcctgcacagtttaa
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integrated database retrieval system
