Syngnathus scovelli (Gulf pipefish): 125987250
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Entry
125987250 CDS
T08785
Name
(RefSeq) H-2 class I histocompatibility antigen, K-Q alpha chain isoform X4
KO
K06751
MHC class I antigen
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
sscv04145
Phagosome
sscv04218
Cellular senescence
sscv04514
Cell adhesion molecules
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125987250
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125987250
04145 Phagosome
125987250
09143 Cell growth and death
04218 Cellular senescence
125987250
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125987250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125987250
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
125987250
Exosome [BR:
sscv04147
]
Exosomal proteins
Proteins found in most exosomes
125987250
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
Antigens
125987250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Psg1
C2-set_3
ig
Motif
Other DBs
NCBI-GeneID:
125987250
NCBI-ProteinID:
XP_049607467
LinkDB
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Position
19:complement(5641146..5645404)
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AA seq
380 aa
AA seq
DB search
MLRMNLLVYFVAVVQISSVTPVTIHTLNYFTTVSQVAKLPEFLEVAYVDGVQILQFDSNH
RETKAKHDWVNKITEDNLHFWEIETAINIQNEQIMKGNIETAKKRFNQTGGVHMIQVIKG
CEWDNETDEVDGWEHYRYDGEDFLAFEAKTMTWIATHPQAFTTKIKLDQIGGLNEVKKIT
HTEVCPELLKTHLRNGRVFLTRTELPKVSLLQKTPSSPVTCHATGFYPITSSLFWRKNGE
EIHEDVEMRATLPNHDGTFQTSVDLKVEVTPAAEQEYECVFQLDGVPEDIVIKLDAGSIL
SNARIQEEEDGKKVVAIAVSLVVLSLVVVVVTIILHLIRKQVIYSQACKAEKPKGKEEDN
IVYQQATCILFFNRMLNPKD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcttagaatgaatttacttgtatactttgttgcggtcgtgcaaataagcagcgtgacg
cctgtcaccattcacacgctcaattattttacaacggtgtctcaagttgcaaaactacca
gagttcttggaggtggcgtatgttgacggcgttcagattctgcagtttgacagcaaccac
agggaaacgaaagcaaaacatgactgggtgaacaaaatcacagaagataatctgcacttc
tgggagatagagacggcgatcaatattcagaatgagcagatcatgaaaggcaacattgaa
actgctaaaaagcgcttcaaccaaactggaggtgttcacatgattcaggtgataaaaggc
tgtgaatgggacaatgagacggatgaggttgatggttgggagcactatcgttacgatgga
gaagacttcctagcatttgaggcgaagacgatgacatggatcgcaacacatccacaagct
ttcaccaccaaaatcaagttggaccaaattggtgggcttaatgaagtcaagaagattacc
cacactgaggtgtgtcctgagctgttgaagacacatttgaggaacgggagggtcttccta
acgagaactgagcttcccaaggtgtctctcctgcagaagacgccttcctctccggtcacc
tgccacgccacgggtttctaccccattacatcgtccctcttttggaggaagaacggcgag
gagatccacgaggacgtggagatgagggcgaccctccccaaccacgacggaaccttccag
acctcggtcgacctgaaagtggaggtgacgcccgccgcggagcaggagtacgaatgcgtg
ttccagttggacggcgtcccggaagacattgtcatcaagctggacgccggaagcatcctg
agcaacgcacgcatccaggaagaggaagacgggaagaaggtggtggctatcgccgtctcg
ttggtggtcctcagtctggtggtggtggtggtgacaataatcctccatctcataagaaaa
caagtcatatactctcaagcttgtaaagcggaaaagccgaaaggaaaagaagaagacaat
atagtgtatcaacaggctacgtgcattctgttcttcaaccgaatgttgaacccaaaggac
taa
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