Syngnathus scovelli (Gulf pipefish): 125987257
Help
Entry
125987257 CDS
T08785
Name
(RefSeq) major histocompatibility complex class I-related gene protein
KO
K06751
MHC class I antigen
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
sscv04145
Phagosome
sscv04218
Cellular senescence
sscv04514
Cell adhesion molecules
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125987257
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125987257
04145 Phagosome
125987257
09143 Cell growth and death
04218 Cellular senescence
125987257
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125987257
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125987257
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
125987257
Exosome [BR:
sscv04147
]
Exosomal proteins
Proteins found in most exosomes
125987257
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
Antigens
125987257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_3
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
125987257
NCBI-ProteinID:
XP_049607484
LinkDB
All DBs
Position
19:5557816..5560184
Genome browser
AA seq
361 aa
AA seq
DB search
MNNILTLLLALAVWNVQDTSADIHSLKYFITATSGVKNFPEFVGAAEVDGVRVGYCDSNI
QSAKPKQEWMQQLVRDVPDQLDWYKRKCLGNQHVFRRNLKDLSHRLNQSGGSHVLQRMNG
CEIDDESGEIVGYNQYGYDGEDFIVLNLETLTWTTPSPQAFTTKLIWDTQKERLEYNRDY
YKVKCPEWLKMYVHYGKSVLQKKELPSMALLQKTPTSMVCCHATGFYPRLAMMFWRRGGE
ELHEHIEHGELLPNHDGTFQMSVNLNVSAVLLAEWPEYECVFQFGGVKEQLVIKLDQDAI
QSNWIPPRRVPAGVVFGGILLSLLAATAVGCCIRKRNADGEFQAVDVGPEFAQSHVGDCE
Q
NT seq
1086 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacatcttgacgttgctgctcgccttggccgtatggaatgtacaggacacatct
gcagacatacattccttgaaatacttcatcacggcaacttccggtgtgaaaaacttcccc
gagtttgtgggggctgctgaggtggacggcgtccgggtgggttactgtgatagcaacatc
cagtcggcgaaacccaaacaggaatggatgcagcagctggtccgggacgttccggatcaa
ctggactggtataagcgcaagtgcttaggcaaccagcacgtcttcaggagaaacctcaag
gatttgagtcaccgcttaaaccagtctggaggcagccatgttttacagcggatgaacggt
tgcgaaattgacgatgaaagcggcgagatcgtgggctacaaccagtacggctatgacgga
gaagacttcatcgtgctgaacctggagacgctgacgtggacgacgccctccccgcaggcc
ttcaccaccaagcttatttgggacacgcagaaggagagactggagtacaacagagactac
tataaagtcaagtgcccggagtggctgaagatgtacgtgcactacgggaagagtgtcctg
cagaaaaaagagcttccctcgatggctctcctccagaagacacccacctcgatggtctgt
tgccacgccacgggcttttaccccagactagccatgatgttctggaggagaggcggcgag
gagctccacgaacatatagaacatggcgagctcctgcccaaccatgatggaaccttccag
atgagcgtgaacctgaacgtgtcggcggtgcttctcgctgagtggcccgaatacgagtgc
gtgtttcagtttggtggtgtcaaggagcagctggtcatcaaactggaccaagacgccatc
caaagcaactggattcctccccgaagggttccggccggtgtggtcttcggaggcatactg
ctgagccttctggcggccaccgccgtgggatgttgcatccggaaaagaaatgctgacggc
gaatttcaggctgttgacgtgggcccggaattcgcccaatcccacgttggagactgtgag
cagtga
DBGET
integrated database retrieval system
