KEGG   Syngnathus scovelli (Gulf pipefish): 125987995
Entry
125987995         CDS       T08785                                 
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sscv03036]
    125987995
Enzymes [BR:sscv01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     125987995
Chromosome and associated proteins [BR:sscv03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     125987995
   Histone demethylases
    125987995
SSDB
Motif
Pfam: KDM6_C-hel TPR_1 JmjC KDM6_GATAL TPR_2 TPR_8 TPR_17 TPR_16 TPR_12 TPR_19 TPR_CcmH_CycH TPR_9 TPR_11 TPR_7 ANAPC8 ANAPC3
Other DBs
NCBI-GeneID: 125987995
NCBI-ProteinID: XP_049608644
LinkDB
Position
2:complement(5172261..5191838)
AA seq 1472 aa
MQSCSVSVAVAACAAVRSLGSASDGGGDEEKKMAAGKASETEEDFPTLTAQERDSLAGID
SSLFGFQKLHEDGARTKALLMKAVRCYDSLILKAEGKVEPEVFCQLGHFNLLLEDYPKAL
SAYQRYYSLQSDYWKNAAFLYGLGMVYFHYNAFQWAIKAFQEVLYIDPGFSRAKEIHLRL
GLMFKVNTDYESSLKHFQLALIDSNPCTLSKAEIQFHIAHLYEIQKRYRAAKEAYESLLQ
TEDLPAQVKATTLQQLGWMHHTVEQLGDKASRDSYAIQCLQKSLEADPNSGQSWYFLGRC
YSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHSHAA
AWMDLGTLYESCNQPHDAIKCYINATRSKACTNATMLTHRIKCLQAQLSNPQLSSPQSKT
KMLPLIEEAWSLPIPAELTSRQGGLSSAPQQACKPNHAAEGGGSGQSLPPHVAALGQADD
QSCPAKRKRASSPAKGDSWVTNPVQQPIPNWYLSPQKMQLLEQLRSNRASLKPPQLQMLE
QLETQFTMMQQHQMRQNTSGGQVRPSFPNGPTANCLPSPNPSLHPTRPHLGPHRPLCPPQ
PLANGPAGFGAHRHSDTVSLPVEDNSSNSSSSNNNNNQPGPTASGPNRDVPYLQPAGSGN
AALLPHTCTSTQTQDATPHPLHLNSSQVLQKRSVPLTGSNTEGTTSHPHPPSSIAPPQSN
NQVGHSNAATPQQQPAHNHLPSPPSLAPSSTSSGAAPNVSATKDGNTAATLVTASLGNGS
SEGRVPSPLTSADGKVAQSNSLAYNSHLGEEGKAAEGGEKQSLSADNPRLSALLAGEVEG
GEGKPKGTVSTTSPNKVNNIHPVGLPSTPNTQGSSAASSPVSVISTATPSPKCLEHTQTG
SHSPATPIATAPAVNGNGKGGISEDSQSPIKAEPPAVAGLKATPPHGSSSSSSSSSSSSV
SIYPSSTDVLKACRNLGKNGLSNSSILLDKCPPPRLPPPPLPALPKDKLNPPTPSIYLEN
KRDAFFPPLHQFCTNPSNPVTVIRGLAGALKLDLGLFSTKTLVEANPDHLVEVWTQLSQP
ADENWDVTGTKKMWRCESARAHTTIAKYAQYQAASFQESLREENEKKALKEPCEAEPAAE
SVVRKRRGPLKHIKFGTNIDVSDERKWKQQLQELSKLPAFARVVSAGNLLSHVGHTILGM
NTVQLYMKVPGSRIAGHQEHNNFCAVNINIGPGDCEWFAVPEAYWGVMSDFCEKNNINFL
MGSWWPNLEDLYEADVPVYRFIQRPGDLVWLNTGTVHWVQAIGWCNNIAWNVGPLTAHQY
KLAVERYEWNKLQSVKSMVPMVHLSWNMARNIKVSDHKLFEMIKYCLLRTLKQCQWVKEA
LATAGKETVLRNRTRDEAAHYCTICEVEVFNLLFVRRELLSKKQYVVHCQDCARKGSATL
DDFVVLEQHRMEDLMQVYDQFALAPPLHSSSS
NT seq 4419 nt   +upstreamnt  +downstreamnt
atgcaatcgtgcagtgtgtctgtcgctgttgctgcctgcgctgctgttcggagtctcggc
tcagcttctgatggtggtggtgatgaggaaaagaaaatggcggcgggaaaagcgagtgaa
acagaggaggactttcctacactgacagcccaggaaagggacagtttggccgggattgac
agctcactatttggatttcagaagcttcatgaagatggcgccagaacgaaggccctgttg
atgaaggctgtccgctgctacgattcgcttatcctcaaggcggagggaaaagtggagcct
gaggtgttttgccaactaggccacttcaacctcctcttggaggactacccaaaagcatta
tcggcataccagaggtactacagtttacagtcagactactggaagaatgctgcctttctg
tatggtctgggaatggtctacttccactacaatgcctttcagtgggcgatcaaagcattc
caggaagtgttgtacatagatccaggattttcccgagccaaggagatccaccttcgactg
ggtctcatgtttaaagtcaacacagactatgagtcaagcctaaagcattttcagctagct
ttgattgactccaatccctgcactttgtccaaagctgaaattcagttccacattgctcat
ttatatgagattcagaagagatatcgggctgccaaggaggcctatgaaagcctcctgcag
acagaggatcttcctgcacaggtgaaagccactactctgcaacagcttggctggatgcat
cacacagtggagcagctcggggacaaagccagtagggatagttatgctatccagtgtttg
cagaaatctctggaggcagatcccaactctggacagtcatggtacttcctgggcaggtgc
tactctagtattggaaaggtccaggatgccttcatctcctatcggcaatccatcgataaa
tctgaggccagcgcagatacttggtgctctataggggtgctgtatcagcagcagaaccag
cccatggatgcgctgcaggcctacatttgtgctgtgcagctggaccacagccatgccgct
gcctggatggacctgggcacgctgtacgagtcgtgcaaccagccgcatgacgccatcaag
tgctacatcaacgccacacgcagcaaggcatgcaccaatgccaccatgttgacccaccga
ataaaatgcctgcaggctcagttgagtaacccccagctcagtagcccacagagtaaaact
aaaatgctccctcttattgaggaggcatggagtctaccaatcccggctgagctcacctct
aggcagggaggcctgagcagtgcgccacagcaggcctgtaaacccaaccatgctgcagag
ggtggcggttcaggtcagtctctgcctcctcacgtggccgcactgggccaagcagacgac
cagtcttgcccagccaagaggaagcgagcttccagccccgccaagggagattcctgggtc
actaatccagtgcagcagcccattccaaactggtacctctccccacagaagatgcagtta
ttggaacagctacggagtaatcgagccagcttgaaacctccacagctgcagatgttggag
cagctggaaactcagttcaccatgatgcagcagcatcagatgcggcagaatacatcagga
ggtcaggtgcgcccctccttccccaatggccccactgccaattgcctcccatcccctaat
cccagcctgcatcccacgcggccccatctgggacctcatcggccactgtgcccccctcaa
cctttggccaatgggcctgcgggttttggggcacacagacactcagatacagtctccctt
cctgtggaggacaatagtagtaacagtagtagtagtaataataataataatcagccgggg
ccaacagcctcggggcccaatagagatgtgccttatcttcaacctgccggcagcggcaac
gcagcactgctacctcacacctgcacaagcacgcaaacacaggacgccacgccacaccct
ctgcaccttaattcctctcaggtgctgcagaagcgatccgttcctcttacgggctccaat
actgagggaaccacctctcacccgcatccccccagctccattgctcccccacagtccaac
aatcaggttggacattcaaacgctgcaacgccacagcaacagccagcgcacaaccaccta
ccatcccctccctctcttgccccttcctctacctcaagtggggcagcacccaatgtgtcc
gctaccaaagatggcaacactgcagccacccttgtgaccgcatcccttggtaatggcagt
tctgagggcagggtgccttcgccattgacatcagcagacggcaaagtggcgcagtctaac
agcctggcttataatagccacctgggggaagagggcaaggcagcagaaggtggtgaaaag
cagagccttagcgcagacaatccaagactatctgccctgctggcaggggaggtggaggga
ggtgagggaaagccaaaagggactgtatcgacgacatctcccaacaaagtcaacaacatc
caccctgtgggcttgccctcaacccccaacacacagggaagctcagctgcctcctcgcct
gtctctgtcatatccacggccacaccctcgcctaaatgtttggaacacacacagacaggc
agccatagtcccgccacacctatagcaaccgcaccggctgtcaatggtaacggcaaaggg
ggaatctcggaggactctcagagcccgatcaaggctgaaccacctgctgtcgctggtctc
aaggccacgccaccccatggctcgtcttcatcatcgtcatcgtcttcatcatcatcggta
tcaatctaccccagctccacagacgtgctgaaggcctgcagaaatctgggcaagaatggg
ctttctaatagcagcatccttctcgacaagtgcccgccgccacggctgccccctcctcct
ttgccagccctgcccaaagacaagctcaatccaccaactcccagcatatatctggaaaac
aagagagatgctttctttccaccattgcaccagttctgcacaaatccctccaatcctgtc
actgtcatcagaggactggctggagcactcaaactggacctgggccttttctccacaaag
acgttggttgaggccaacccagaccatttggtggaagtgtggacccagttgtcacaacct
gcggatgagaactgggatgtgacgggcactaagaaaatgtggcgttgcgaaagtgctcga
gcccatacaaccatcgccaagtatgcgcaatatcaggctgcttctttccaggagtctctg
cgggaggaaaatgaaaaaaaggcactcaaggaaccctgtgaggcagagccagctgcagag
agtgttgtgcgcaaaagaagaggacccttaaagcacatcaagttcggaacaaacatcgac
gtgtcagacgaaagaaagtggaagcagcagctccaggaactcagtaaactgccagcgttt
gctcgtgtcgtatcggctggcaacctgctcagccacgtgggccacaccatattgggaatg
aacactgttcagttgtacatgaaggtcccggggagccgaatagcaggtcaccaggagcac
aacaatttctgcgcagtaaacatcaacattgggcctggagactgtgaatggtttgctgta
ccagaagcctactggggtgtgatgagcgacttctgtgaaaagaacaatatcaactttctg
atgggctcatggtggccaaacttggaggacctgtatgaggctgatgtgcccgtgtaccgc
ttcatccagcgccctggtgacctggtatggctcaacacgggcactgtccactgggtgcag
gccattggctggtgcaacaacattgcctggaatgtcggaccccttacagcccatcagtac
aagttggcagtggagcgttatgagtggaataagctccaaagtgtgaaatccatggttcct
atggtgcacctgtcttggaacatggcacgtaacattaaagtgtctgatcacaagttgttt
gagatgatcaagtactgtttgctgcggacgctgaagcagtgccagtgggtgaaggaagca
ttagcgacagctggcaaagaaacagttctgaggaacagaaccagagacgaagcggcccac
tactgcaccatctgtgaggttgaggtgttcaatctgttatttgtacgccgtgagctcctg
tccaagaagcagtatgtggtccactgccaggactgtgctcgcaaaggcagcgccacactg
gatgactttgtggttctggagcagcacaggatggaggacctcatgcaggtctacgatcag
tttgcattagcccctcctcttcattcatcttcatcttga

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