Syngnathus scovelli (Gulf pipefish): 125988217
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Entry
125988217 CDS
T08785
Symbol
plxnd1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
125988217 (plxnd1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
TIG_2
Motif
Other DBs
NCBI-GeneID:
125988217
NCBI-ProteinID:
XP_049609063
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All DBs
Position
2:complement(9194249..9243965)
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AA seq
1903 aa
AA seq
DB search
MPPPMEIALVLLGVLALEARRSVSALRVQQQFATPNSTNNFAVDPASGKVYVATVNSLYQ
LNATLSVEAHKRTGPVEDNLLCHAPQLPQAPCQHPKSLTDNHNKLLELDREQGVVVACGS
VYQGFCELRKMSNISQIAVEFPPEGEKTVFPSMLNIAANHPDASTVGLVLRGSHGGSDTR
LLVGATYTGAGTQYFPKNHSKEDLRFENTPEIAIRSFDVSDLSRLFTYDINPSEDNVFKI
KQEAKAKNKLNFVRAFNHKTYSYIAFNNDAKMGHKESQPNSVLARICLDTSGQKSNGPES
RKLTESYIQVPLQCGRNGDIYNRLLSVYPADIHDGDAPEAFLFGVFSKGDKKTALCAFRF
ADIEEEIRRGRRSCSNSPSSDVQVLDSVIQGSGAACVQKWNLVLQPEQLDCGAAHLQHPL
ALRRPLRSLPLFQYNGLSSVAVDDVLNHTVIFLGTSNGRLRKVTLTPNMTSASQRTLKLP
ASEPVHHIMTFDPNDRTYLYLMTSHHMLRVKVAQCEQWTSCGDCLAAGDAHCGWCTLENR
CSIQKECAQGLLARAWITMGEGPQQCPSMTLTPPEISIAADIKDVGILINGMVPDLVGFR
VECEYGPGMWTAATLHLGHGPAQIQTCPLLSRENYRPILPGKDHSTVSVAIKVNGTSVVS
GSFVIYDCGRTGAINPKTSCISCLSTKWKCYWDQERQQCVSTKDETKQNLLEDAASCPKL
LAAEVPPSPSGAAQDFSVSLSNVQEGEELECDFGTERRYEATWLNSTTVKCSSVTLSTNQ
RNHIYQLNLRRRGRFGEGTYVDNPEPMKVEVYNCGVGSGDCSQCWGREDQGHLCGWCENS
CGLRDDCQPIKHQCPAPEIHKIFPLRGPVDGGTRLTVQGKNLGRRAEAVKVSIGEVPCAL
LPELYTVSVELVCVTGRSPLDGTDIVQVDVDQSGTGKSKEAFSYLVPKMVSMEPKKGSRS
GGTRVTISGEHLGIGSQVRVMVNNTLECIIAEQTDDSIQCTMPPAPQASSESVPVCVEFE
NVVCQSEQLSTTYTYEKNPTISFIKPDKSFLSGGRIITVAGHGFDLVQSATMQVAEIGQT
LCTVVSSSMITCPSPPSSQSQPSSVQFYLNGVLYTGDRPSPSDNEASEEEEGEEEEDEDE
LHKGHFLLEYVEDPQFFTANKEKLIKHHPGEQLTLIINKGPSDLELMPDEYSVMIGPYPC
NISFHNDQLFHCTISGLLSSRENEMPVTVQVGNFRHTIAKVQLGGSELAIVVSIVVCCVL
LLLCTVALVVYCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNR
SQGIPFLEYKQFVTRTFFPKMCSDYERSLVQPAYEYDALGPRALPETHPLLQDWQASSPT
RPNVEEGITLFATLLNNKHFLITFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTSI
MKDLLVDLIDASASKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIK
QQINKGSIDAITGKARYTLNEEWLLRENIEAKPQNINVSFQGCGMDSLSVKVMNMDTICQ
VKEKIIEAFYKNLPFSQWPRAEDVDLEWFDSGSNSKPLQDLDNSSVMEDGRKKLNTIFHY
QIPEGASLAMSLQDKKENTLGRVKDLDTEKYVHLVLPHDELMETKKSHRQSHRKKVLPEI
YLTRLLSTKGTLQKFLDDLFQAILSIPPEQPPLAIKYFFDFLEEQADKRGITDPDTLHIW
KTNSLPLRFWVNILKNPQFVFDIDKTDHMDACLSVIAQAFIDACSISDLQLGKDSPTNKL
LYAKEIPEYKKRVQCYYKQIQEMAPLSEQEMNAHLAEESRKYRNEFNTNLALTEIYKYAK
RYRHQVVTALECNPTARRTQLQHKFEQVVALVEDNIYECCSEA
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctccgatggagatcgctctcgtgctcctcggcgtactcgcgttggaggcgcgc
cggagcgtcagcgcgctgcgcgttcagcagcagttcgccactccgaacagcaccaataat
ttcgcggtggacccggcgtccgggaaggtctacgtggccaccgtcaacagcctctaccag
ctcaacgcgaccctgagcgtggaggcgcacaagaggacggggccggtggaggacaacctg
ttgtgccacgcgccgcagcttccgcaggctccgtgccagcatcccaagtccctcacggac
aaccacaacaagcttctggagctggaccgtgagcagggcgtcgtggtcgcgtgcggctcg
gtataccagggcttctgcgagctccggaagatgagcaacatctcccagatcgcggtggag
ttcccacccgagggcgagaagaccgtgttccccagtatgctcaacatcgccgccaaccac
ccagacgcgtcaacagtggggctcgtcctacgcgggagccacggtgggagcgacactcgg
ttgctcgtcggggccacctacaccggcgccggtacgcagtatttccccaaaaaccacagc
aaggaagacctgcgcttcgaaaacactccagagatcgccatccgctcctttgacgtcagc
gatctgtccagacttttcacctatgacattaacccctctgaggataacgtgttcaagatc
aaacaggaggccaaagctaaaaacaaactcaactttgtgcgtgccttcaatcacaagacc
tactcgtacatcgccttcaacaatgatgccaaaatgggccacaaggagagccagcccaac
agcgtcctggccaggatctgtttggacaccagcggccaaaagtccaacgggcccgagagt
aggaaactcacagagtcctacatccaggtgcccctccaatgtggacgcaacggcgacatt
tacaaccggcttctgtccgtctaccccgccgacatccacgatggagacgccccggaggct
ttcctctttggagtcttctccaagggggacaagaagaccgccctgtgtgccttcaggttt
gcggacattgaggaggagatccgtcgagggcgcaggagctgctccaactcgcccagcagt
gacgtccaggtgctggacagtgtcatccagggctccggggcagcctgcgtccagaagtgg
aacttggtgctgcagccggagcagctggactgcggtgcggcccacttgcagcaccctctg
gccctcaggaggcccttgaggtcgcttcctttgttccaatacaacggcctgagctctgtg
gctgtggacgatgtgctcaaccataccgtgatttttctgggaacctccaatgggcgactt
cgaaaggtgaccttgacaccaaacatgacgtcggccagtcagcgcacactaaagctgccg
gccagcgagcctgtccaccacatcatgacctttgatcccaatgacaggacctatctttat
ctcatgacctcccaccatatgctgcgggtcaaagtggcccaatgtgagcagtggacgagc
tgcggtgactgtttggcagcaggtgacgcccactgcggatggtgcactttggagaacagg
tgtagcatccagaaggagtgtgcccagggactcttggcacgtgcgtggatcaccatgggt
gaaggcccccaacagtgtccttccatgaccctgacaccgccggagattagcatcgctgca
gatatcaaggacgtgggcatccttatcaacggcatggttcccgatctggtgggtttccgg
gtggagtgcgaatacgggccggggatgtggaccgccgccaccttgcacctgggccacgga
cccgctcagatccagacgtgtcccctcctctctcgggaaaactaccggccaatcctcccg
ggcaaagatcattcgactgtctccgtggcgatcaaagtcaacggcacgtcggtggtctct
ggaagtttcgtcatctacgactgcgggcggaccggagcgataaaccccaaaacctcctgc
atcagctgcctgagtacaaagtggaagtgctactgggaccaagagaggcagcagtgtgtc
tccactaaggatgagacaaagcagaaccttctggaggacgccgcttcctgtcccaagctg
ctggccgcagaggttcctccatcgccgtcgggggcggcccaggacttttctgtatctctg
agtaacgtccaagagggggaggaacttgagtgcgactttgggaccgagcggcgatacgaa
gccacctggctcaacagcaccactgtcaagtgcagcagcgtgacattgtccactaatcag
aggaatcacatctaccagctcaacctgagaaggaggggccgctttggtgagggcacctat
gtggacaaccctgagcccatgaaagtggaggtgtacaactgcggcgtgggcagcggcgac
tgctcacagtgctggggccgtgaagatcagggccacctctgcggatggtgtgaaaacagc
tgcggactgagggatgactgtcagccaatcaaacatcaatgtccagcgcctgagatccac
aagatcttcccactgaggggtccagtggacggaggcacccgcctaacggtgcagggaaag
aacttgggccgcagggctgaagcagtcaaagtatccatcggagaggttccgtgtgcgctc
ctgcccgagctctacactgtctccgttgagctggtgtgtgtcaccgggaggtctccgctg
gacgggacggatatcgtccaagtggacgtggatcagagcgggacggggaagtcgaaggag
gccttctcgtacttggtcccaaagatggtctccatggagcccaagaaaggctcacgttcc
ggaggaacccgagtgaccatcagcggcgagcatctgggaattggttctcaggtccgagtc
atggtcaacaacacgctggaatgcattatcgccgagcaaacggacgacagcattcagtgc
accatgcctccggccccgcaggcgagcagcgagtccgtgccagtgtgtgtggagtttgaa
aacgtggtgtgtcagagtgagcaactgagcactacgtacacgtacgaaaagaaccccacc
atcagcttcatcaagccggacaagagcttcctcagcggcggaaggatcatcacagtggcg
ggccatggctttgacctggtgcagagtgccaccatgcaggtggcggaaattggacaaact
ctctgcacagttgtttcgtcctctatgatcacatgtccgtcgccaccctccagtcagtcc
cagccgagttcggtgcagttctatttgaatggagtcctctacacgggggaccgcccctct
ccttctgataatgaggccagtgaggaggaggagggggaggaagaggaggatgaagatgag
ctgcataaaggtcacttcctgttggaatacgtcgaggaccctcagtttttcacagccaac
aaagaaaagttgattaaacatcacccaggagagcagctgacactcatcatcaataaaggg
cccagcgatctagagctgatgccggacgaatactcggtgatgatcggcccgtacccgtgt
aacatcagcttccacaatgaccaactgttccactgcaccatcagcggcctgctgagctcc
cgcgagaacgagatgcccgtcaccgtgcaagtgggcaactttcggcacaccatcgccaag
gtgcagcttggcggcagcgagctggccatcgtggtgtccatcgtggtgtgctgcgtcctg
ctgctcctctgcaccgtagcccttgttgtgtactgcacaaagagccgaagggcggaacgc
tactggcagaaaactttactccaaatggaggagatggagtcccagatcagagaggagatc
cgtaaaggctttgcggaactacagacggacatgacggacctgaccaaggagctcaatcgc
agccagggcatccccttcctggagtacaaacaatttgtcacccgcaccttctttccaaag
atgtgctcggattacgagaggagtttggttcagcctgcctacgaatacgatgctttgggc
cctcgagctctgccggagacgcacccgctgctgcaggactggcaggccagcagcccgacc
agacctaacgtagaggaaggcatcactctgttcgccacgcttctcaataacaagcacttc
ctcatcaccttcgtccacgccctggagcaacagaaggactttgctgtacgagacaggtgc
agtctggcatctctgctcaccatcgccctccacggcaagctggagtattacaccagcatc
atgaaagacctgctggtggacctcatcgacgcatcagcctccaagaaccccaagctgatg
ctgcgccgcaccgagtctgtggtggagaaaatgctcaccaactggatgtccatctgcatg
tacagctacctcaaagaaaccgtgggcgagccatttttcctcctgctgtgcgcaatcaag
cagcagatcaacaagggttccatagatgccatcacggggaaagcccgctacacccttaac
gaggagtggctgctccgtgagaatatcgaagccaagccacagaacatcaacgtgtccttc
cagggctgcggcatggactcgctatctgtcaaggttatgaatatggacaccatctgccag
gtgaaggagaaaatcatcgaagccttctataaaaacttgccgttctcccagtggccccga
gcggaagacgtggacctggagtggtttgactctggcagcaacagcaaacctctgcaagat
ctggacaactcctcagtcatggaggatggccgcaagaaactcaacaccattttccattac
cagatcccagaaggggcgtcgctcgccatgagcctgcaagacaagaaagagaacaccctg
gggagagtcaaagatctggacacagaaaagtacgttcacttggtccttccccacgacgag
ctgatggagaccaagaagtcacacaggcaaagccaccgcaagaaggtgctgcctgaaatc
tacctgacacgccttctgtcgaccaagggaacgctccagaagttcctggatgaccttttt
caggccatcctcagcatccccccagaacagcccccactggctatcaaatacttctttgac
tttctggaggagcaggccgacaaacggggaatcactgacccggacaccttacacatctgg
aaaaccaacagtttaccgctacgattctgggtcaacatcctgaagaatccccagtttgtc
tttgacatcgacaagacggatcacatggacgcgtgtctgtccgtcatcgcgcaggccttc
attgacgcctgctccatttccgacctgcagcttggcaaggattctccgaccaacaagctg
ctgtacgctaaggaaatcccagagtacaagaagagggtgcagtgctactacaagcagatc
caggaaatggcgcctctcagcgagcaggagatgaacgctcacctggccgaggagtctcga
aagtacagaaatgaattcaacaccaacctggccttgacggagatctacaaatacgccaag
agatacagacaccaggtggtgaccgccctggagtgcaacccgacggcgcgtcgcactcaa
ctccagcacaagttcgagcaagtcgtcgccctggtggaggacaacatctacgagtgctgc
agtgaagcctga
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