Syngnathus scovelli (Gulf pipefish): 125988273
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Entry
125988273 CDS
T08785
Name
(RefSeq) nuclear receptor subfamily 4 group A member 2 isoform X1
KO
K08558
nuclear receptor subfamily 4 group A member 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125988273
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sscv03310
]
125988273
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
125988273
Nuclear receptors [BR:
sscv03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
125988273
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Crystallin
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
125988273
NCBI-ProteinID:
XP_049609212
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Position
2:3859098..3863193
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AA seq
568 aa
AA seq
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MPCVQTQFSSSPPGASPASQSAVGERSCDFITPEFVKFSMDLANSEISASPSGAEAYSCG
YDVKPQCLFQMPHHRELSCVKTEDTRGCPARFQPGQHLQAADLLSSTSSVYYYQSSSSRA
PIMPNFQSPPIWEDSGPLIPQDYSAQRKNSLSRFSLFSIKHTEEDNRNFSSPMKFDRPFH
LSTNVDQALDSSGLFCCTGLQGCAGFHPLQLAHTQHLRNNLSPSTCTPSRGRPSAEGLCA
VCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLAAKSCPVDKRRRNRCQYCRFQKCL
AVGMVKEVVRTDSLKGRRGRLPSKSKVLLDSSPPINLLLSSLVRAHVESNPSPSRLDYGK
FKENPESPPGDDAHHVRQFYGLLTRSMEVIRAWALKIPGFVSLTKHDQDLLFYSSFLELF
VLRLSYRSNPDEDKLIFCDGSVWHRLQCLRGFGEWIDSIVEFSNNLHRMNLDISTFSCIC
ALALVTERHGLKEARKVEELQSSVVQCLKDGSVYADRDAKHLYRLVEKLPELRTLCIQGL
QRIFYLKLEDLVPPPAIIDKLFLDTLPF
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgccatgcgtgcagacgcaattcagctcctctcctccaggagccagcccggcgtctcag
agcgccgtcggagagcggagctgtgatttcatcactccggagtttgtcaagttcagcatg
gaccttgcgaacagtgaaatctcagcttcgccgtcgggcgcagaagcttacagctgcggc
tacgacgtcaagccccagtgtctattccaaatgccgcatcaccgggagctgtcgtgcgtc
aagacggaagatacgcgtggttgcccagcgagatttcaacctgggcaacatctgcaggcg
gctgatttgctctcctccaccagttccgtttactattaccaatcttcatcctcgcgcgca
cccatcatgcccaactttcaaagtccaccaatatgggaggactctggtcctctgatccct
caagactattcggcacagaggaaaaactccttatccagattctcactgttttccatcaaa
catactgaagaagacaatcggaacttttcaagccccatgaaatttgatcgccctttccac
ctgtccaccaatgtggaccaagcgctggactcttcgggtcttttttgctgtaccggactg
caggggtgtgcggggtttcaccctctgcagctcgcccatactcagcacttaaggaacaac
ctgagtccttccacgtgcacccccagccgaggacgaccgagcgcggagggattgtgcgcg
gtgtgcggggacaacgcagcctgccagcactacggagtgagaacttgcgagggatgcaaa
ggattcttcaagcgcacagtgcagaaaaatgccaagtatgtgtgtttggcggccaagagt
tgccccgtagacaaacgaaggaggaaccgctgccagtactgtcgcttccagaaatgcctg
gcggtcggaatggtcaaagaagtagtgcggacagacagtctaaaaggtcgcaggggtcgt
cttccttccaaatccaaagttctcctcgactcgtccccgccgattaacttgctgctgagt
tccctcgtccgagcgcacgtggagtccaacccgtcgccctcgcgcctggactacggcaaa
ttcaaagaaaacccggaaagtcctccgggagatgatgctcaccatgtacgtcagttttac
ggactcctgacccgatcgatggaagtgattcgggcgtgggcgttaaagattccgggattt
gtctctctgaccaaacacgatcaagaccttctgttctactcgtcatttttggagctcttt
gtgctacgtctgtcatacagatcgaaccccgatgaagataaattgatattctgcgacggc
tccgtgtggcaccgcctccaatgtctgcggggatttggcgagtggattgatagcatcgtc
gagttctccaacaatctacacaggatgaatttggacatctccaccttctcctgcatatgt
gccctcgccttggtcactgagcgacacgggctgaaggaagcgcggaaggtggaggagctg
cagagtagcgtggtccaatgtttgaaggacggcagcgtgtatgcagatagagacgccaag
catttgtacagactggtggaaaagcttcctgaacttcgcactttgtgcattcaaggcctg
cagaggattttttatttaaagttggaggatctggtgccgccacccgcaatcatagataag
ttattcctcgacacgttgcccttttga
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