Syngnathus scovelli (Gulf pipefish): 125988576
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Entry
125988576 CDS
T08785
Name
(RefSeq) radixin
KO
K05762
radixin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04517
IgSF CAM signaling
sscv04530
Tight junction
sscv04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125988576
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125988576
09142 Cell motility
04810 Regulation of actin cytoskeleton
125988576
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125988576
04147 Exosome [BR:
sscv04147
]
125988576
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Ezrin/Radixin/Moesin
125988576
Exosome [BR:
sscv04147
]
Exosomal proteins
Proteins found in most exosomes
125988576
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ERM_C
FERM_M
ERM_helical
FERM_C
FERM_N
Motif
Other DBs
NCBI-GeneID:
125988576
NCBI-ProteinID:
XP_049609874
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Position
2:1431343..1438590
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AA seq
581 aa
AA seq
DB search
MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYFTWLK
LNKKVTQQDVKKENPLQFKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDENYCPPE
TAVLLGSYAVQAKYGDYTKDVHKPGYLTHDRLLPQRVLEQHKLTKEQWEDRIQTWHEEHK
GMLREDSMMEYLKIAQDLEMYGVNYFEIRNKKSTQLWLGVDALGLNIYEHEDKLTPKIGF
PWSEIRNISFNDKKFVIKPIDKKAPDFVFYTPRLRINKRILALCMGNHELYMRRRKPDTI
EVQQMKAQAREEKHHKQMERAQLENEKKKREAVEKEKEKILREKGELMERLRQIEEQTTR
AQKELEQQTRRAMELELERINAREEAERLDRERRAAEEAKGELAKQAADQQKNQEQLAAE
LAEFTAKIALLEDAKKKKEDEANEWQHKALSAQEDLDKTKEELKAAITVPPPVSGGHAES
EHDEQDENHAEASAELSNDGVCQLDLRSEEARVTEAQKNERVKKQLQTLSSELAEARDET
KKTQNDVLHSENVKAGRDKYKTLRQIRQGNTKQRIDEFESM
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaccgattaacgttcgtgtgaccaccatggatgcagagctggagtttgccatt
cagccaaacaccactggaaaacagctttttgatcaggtggtgaagacagtggggctacgg
gaggtctggttttttggcctccagtatgtggatagtaagggctacttcacatggctgaaa
cttaacaaaaaggtgacccagcaagatgtgaagaaagagaacccgctgcagtttaaattc
cgagccaaattcttccctgaggatgtttcggaggagctcatccaggagatcacccaaagg
ctcttcttccttcaggtgaaagaggccatcctcaacgatgagaactattgtcccccggaa
actgcggtgttgctcggctcttatgccgtacaggccaaatatggagactacaccaaagat
gtccacaagcctggatatctcacacacgacagactactgcctcagagagtgctggagcag
cacaagcttaccaaagagcagtgggaggaccggatccagacttggcacgaggaacacaaa
ggaatgctcagagaggactcaatgatggagtatttgaaaatagcccaggacctggagatg
tacggcgtcaactactttgaaatcagaaacaagaagagcacacagctctggctgggtgta
gacgcgctcggccttaacatctacgagcacgaagacaagttgacaccaaagattggcttc
ccctggagcgagattcgaaacatctcctttaacgacaagaagtttgtgatcaaacccatt
gacaagaaagcacctgactttgtgttttacactccgcgactgcgcatcaacaaacgcatc
ttggcgctgtgcatgggtaaccatgagctgtacatgaggaggaggaagcccgacaccatc
gaggtgcagcagatgaaggctcaggctcgggaggagaagcatcacaagcagatggagaga
gcccagctggagaacgagaagaagaagcgagaggctgtggagaaggagaaggaaaagatc
ttgcgtgagaaaggcgaactcatggagaggctgcgacagattgaggagcagaccacaaga
gctcaaaaagagcttgagcagcagacacggcgagcaatggagctggagctggaacgaatt
aacgcgcgagaggaagccgagaggttggacagggagagacgagcggcagaggaggccaaa
ggcgagctggccaaacaggctgcagaccagcagaagaaccaggagcaactggctgcggag
ctggctgagttcacagccaagatcgcacttctggaagacgccaagaagaagaaagaggat
gaggccaacgaatggcaacacaaggctctttcagctcaggaggacctagataaaaccaaa
gaggagctgaaggcagccataacggtgccaccccccgtgagtggcggccacgcagaaagc
gagcacgacgaacaggacgagaaccacgccgaggccagcgccgagctgtccaacgatggc
gtctgccagctggatctgcgcagcgaggaggctcgcgtcaccgaggctcagaagaacgaa
cgggtcaagaaacaactccagactttaagctccgagttggccgaagccagagacgaaacc
aagaagactcagaacgacgtcctgcactctgaaaatgtcaaggcgggccgggacaagtac
aaaacgctgcgtcagatccggcagggcaacaccaaacagcgcatcgatgagtttgagtcc
atgtga
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