Syngnathus scovelli (Gulf pipefish): 125988590
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Entry
125988590 CDS
T08785
Symbol
raph1b
Name
(RefSeq) ras-associated and pleckstrin homology domains-containing protein 1b isoform X1
KO
K23488
Ras-associated and pleckstrin homology domains-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125988590 (raph1b)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
125988590 (raph1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA_2
RA
PH
PI3K_rbd
PH_11
RBD
Motif
Other DBs
NCBI-GeneID:
125988590
NCBI-ProteinID:
XP_049609902
LinkDB
All DBs
Position
2:complement(1496485..1520417)
Genome browser
AA seq
1511 aa
AA seq
DB search
MEQVSDDELDHGAEEDSDKEDQDLDKMFGAWLGELDKLTQSMDDGRPQKALQKPPLRQET
NIANFSYRFSMYNINEALNQGDTVDLDALMADLCTIEQELSTISKPNSRNQSKRAPGGRG
ASTKQPGTSGGGSSSGGSASSSTRASPANTVRGGSGVTTRPVASNISLDDITSQLEKASL
SMDEAARQTSSSSSSSSSSFSSTTMRRPSSGSSGGGQHHRRTGSVGAVSEQEAPSQRSSV
NSACASASSMDSLDIDKGVTTGGEADGRSSPTLQRQNQTSTEHVTPRWADGKTARRRLDF
TSQEDEVDRATHSYLDQETSLILKSIAGKPSHLLTKEEHAAKIKAEKIRVALEKIKEAQV
KKLVIRVHMSDESSKTMMVDERQTVRQVLDSLLDKSHCGYSPDWSLVETITELQMERIFE
DHENLVENLLNWTRDSHNKLMFIERIEKYALFKNPQNYLLGRKETSEMADRNKEALLEEC
FCGGSVSVPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKAKASRDLVCFLQLDHV
NVYYGQDYRSKYKAPTDYCLALKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKYGKQ
LYMNYQEAMKRTEAAYDWSSLSTSSIRSGSSSASIPESQSNHSDSGVDTGSAHGRSQSVV
SSIFSEAWKRGTQLEENTKMRMEASRGATLPHASHSHRHHSQHSVDHSTTAPPSQPLQPP
AHPQQQLQPRTVEQHLPPKLQSPQQVSQPQSPQRLQQQQQTQEPLTMSSSSQQPPHPVNS
YSQMPPPPSLQQQQTHANYNQPLQKVNNYNVAPSQQPPQSHECPPQQQTAPPPPPPPPPP
PPPPPPPVQPMSHYSPALNMYKFSTITRLQNQNQAGSHHRMQPPPSQTAPTAKVHIKPNV
NHIAARTNVPPPPPPPPPPSMPTPGSAMAALKFGPPSPNALAAFMGPQSNGVAFPPPPPP
PPSTAAPISQSTYPITLKHTLKERFPSPPRDLLSANGEVEDSPLPAPNPSPPPPPPPPPP
PPPPPPPQQLPAAAQFPPPPPAAAPKSFSPGFVPHTAPKPVSPVSPFPPAPPPSTMGGLP
PPPPPPPPAPLKKQFSLQTSYTSNQPPPTLPKQHSLSKPPPVSTGTPPVSSLVKHLASQF
PGASTQVANHSENTKVPVSPPAVKSKPRWQPVGSQQLQSSEFPPPPDIANSSGFPAPPLA
PPLAPASCPAPPPPPLPSGNMGSPARTSPSFLGGKQPPPTPQRNSSIKSNSSASYEESRR
NLLSKFAPQSNTTSSSLPSATGSPSKDPSGGPRAPPKPGKLNLANLPLALQAKVSQAKDD
FPSPPSECVNFPPPPPPSELFPPPPGNDSSSGPPKVAVVNPQPQAPPPPPPPPVSNINNS
TWGKSSLKKTPPPTFVRRSNTTPEPPPLSPPPQLPPPTSPKGTSGQPNFLADLNRTLKRK
SVGRQGKTDPAGTMDDMALPPPPPELLLEQEKQSNGGNDGYMSGNISGYATLRRGPPPAP
PKRGDATKLTG
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtatcagatgacgagttggatcatggagccgaggaggacagtgacaaggag
gaccaagacctggacaaaatgtttggagcctggctgggggaattggacaagctcacacag
agcatggatgatggcaggccccagaaggcactgcagaagcctccgctcaggcaagagaca
aacattgccaacttctcctaccggttctcaatgtataacataaatgaggcactgaatcag
ggcgacacggtggacttggatgctctgatggctgacttgtgtaccatagaacaggagctc
agtacgatttccaagccaaactctcggaatcagagcaagcgtgctccagggggacgcggt
gccagcaccaagcagccgggcaccagtggaggtggaagcagcagtggaggaagtgccagt
agcagcactcgggcatctccagccaacacggtgcgaggcggcagcggtgtcaccacccgc
cctgtggcttccaacatttccctggatgacatcacctctcagctggagaaggcctcgctc
agcatggacgaagcggcgcgtcagacgtcctcgtcgtcctcctcgtcctcgtcttccttc
tcctccaccaccatgagacgtccctcgtccggctcatccggcggcgggcagcaccatcgg
cggacgggttcagtgggtgcggtcagcgaacaggaggctccgtcccagcgctccagcgtc
aactcggcgtgcgcttccgcctccagtatggactccctggacattgataaaggcgtgacc
acgggcggggaagcggatggaaggagcagccccaccctccagagacaaaaccaaaccagc
acagagcatgtcacaccgcggtgggccgacggtaaaacggctaggcggcgccttgacttc
acctcacaggaggatgaagtggatcgggccactcactcgtatctggaccaagaaacctcg
cttattctgaaaagcatagctggaaagccttctcacctcctgactaaggaggagcacgcc
gccaagataaaggcagagaagatccgagtggccctggagaaaatcaaagaggcgcaggtc
aaaaagctggtgatcagggtgcacatgtcggacgagagttccaagaccatgatggtggac
gagaggcagacggtcaggcaggtgttggacagtctgctggacaagtcgcactgtggctac
agcccagattggtcgctggtggaaaccattactgagctgcagatggaacgtattttcgag
gatcacgagaacttggtggaaaatctattgaactggacgcgggacagtcacaacaagctc
atgttcatcgagcgcatcgagaaatacgcgctcttcaagaacccacagaactatttgttg
ggccgtaaggagacttccgaaatggctgacagaaacaaggaagctttattagaggagtgc
ttctgtggtggttccgtgtcagtgcctgagattgaaggtgtgctgtggctgaaggacgat
gggaagaagtcatggaagaagcgctactttctcctcagggcttctggaatctactatgtc
cccaaaggcaaagctaaggcgtccagagatctcgtgtgcttcctgcaattggaccacgtt
aatgtctattatggtcaagactatcgcagcaaatataaagcaccgactgactactgcctg
gctttgaagcatccacagatccaaaaaaaatcacagtatattaagtatttgtgctgcgat
gatgtcaggaccttgcaccagtgggtgaatggaattagaattgcaaagtatgggaaacag
ctctacatgaactatcaggaggccatgaaaagaacagaggcagcctatgattggtcctct
ctatctacctcgagcatccgatcaggatccagttctgcaagcatacccgaatcacaatcg
aatcattcagacagtggcgtggacacggggtctgctcatggtcgctcccagagtgttgtg
agttccatcttctcagaggcatggaagagaggcactcaattagaggaaaataccaagatg
cgaatggaggcttccagaggcgccacgttgccacacgcctcccacagtcaccgccaccac
agccaacattcagtcgatcactccacaacggctcctccatctcaacctcttcagcctccg
gctcatccccagcaacaacttcagccacggacagttgagcagcacctgcctcctaagcta
cagtctcctcaacaagtctcgcagccacagtcacctcagcgcttgcagcagcagcagcaa
acacaggagcccctcaccatgagcagctccagccaacaaccgccacaccctgtgaacagc
tacagccaaatgcctccaccaccatcactacaacagcagcagacgcacgcaaactacaat
cagccgctacaaaaagtaaacaactacaatgttgcgccgtcccaacagccaccacaaagc
cacgagtgtcccccacagcaacagacagcacctccaccaccaccaccaccacctcctcct
ccacctcctccaccacctccagtccaacccatgtcacactactctccagcactcaacatg
tacaagttcagtacaataaccaggctgcagaaccagaaccaggctggcagtcaccacagg
atgcaacctccgccatcgcagacagcgcccaccgcaaaggtgcacatcaaaccaaatgtc
aatcacattgcagcaaggactaacgtcccgccccctcctcctcctccaccgccgccgtcg
atgccaacccccggctccgccatggctgcactgaagttcggccctccgagtccaaacgcc
ctggctgccttcatgggtccgcagagcaatggagtagcattcccaccccctcctccccca
cccccatcaacggcagcccccatcagccagtcaacgtatccgatcacactcaagcataca
ctgaaagaaaggtttcccagcccaccacgagatctcctgtctgcaaatggagaagttgaa
gactccccgcttcctgctcctaatccatcaccgccgcctccaccaccaccacctcctcca
ccgccaccaccacctcctccccagcagcttccggcggcggcgcagttcccaccgcctcca
ccggcggcagcacccaaatccttcagcccaggatttgttcctcatactgcccccaaaccc
gtgtcacctgtctcaccattcccaccagccccgccaccatccaccatgggtgggctacca
cccccgccgccccctcctccacccgcacccctcaagaagcagtttagtctccagacaagc
tacacctccaaccaacctccgccgactcttcccaagcagcacagtctgtcaaagcctcct
cctgtttccacgggaaccccccctgtctcgtctttggtgaaacatctggcgagtcagttt
ccaggggcttccacccaagtcgccaatcactcggagaacaccaaagttcccgtctcccca
cctgcggtcaagtccaaaccaagatggcagcctgttggcagtcagcagctgcagtcgtca
gagttcccaccccctccggacattgccaacagtagtggttttccagctccgccattagca
ccacccttggcccctgcctcttgtccagcgccaccacccccgccgcttccttctgggaac
atgggatcacctgcgaggacgtcaccctcctttctaggaggtaaacaacctcctcccacc
ccccagagaaactccagcatcaaatctaactcgtctgcgtcctatgaagaatccaggagg
aacctcctcagtaagtttgccccgcagagcaacacgacgtcatcctccctaccttccgca
actgggtctccgtcaaaggatccctcagggggaccccgtgcaccaccaaaacccggcaag
ctaaacctggccaacctgcccttggctcttcaggccaaagtcagccaggcgaaggatgac
ttcccctctccgccatccgagtgtgtgaacttccctcctccaccgccaccatctgagcta
ttcccacctcctcctgggaatgattctagtagtggacctccaaaagtagctgtggtgaac
ccccagcctcaagcccctcctcctccccctcccccaccagtttctaatataaacaactcc
acttggggtaagagctccctgaaaaagactcctccgccaacatttgtgcgccgtagcaac
accacaccagaacccccaccgctgtcaccaccgccccagctacctccacccacctcacct
aagggcacctcaggccagcccaacttcctcgccgatctaaaccggaccctcaagcgaaaa
tctgtgggcaggcaaggcaaaacggaccctgctgggacgatggatgacatggcgctgccg
ccgcctccccccgagctgctcctcgaacaggaaaagcaaagcaacggaggaaacgacggc
tacatgtccgggaacatctcaggctatgcaacgctccgacgaggacccccacccgcaccg
ccgaaacggggtgatgccaccaagcttactgggtag
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