Syngnathus scovelli (Gulf pipefish): 125988919
Help
Entry
125988919 CDS
T08785
Symbol
b4galt3
Name
(RefSeq) beta-1,4-galactosyltransferase 3 isoform X1
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00510
N-Glycan biosynthesis
sscv00513
Various types of N-glycan biosynthesis
sscv00514
Other types of O-glycan biosynthesis
sscv00515
Mannose type O-glycan biosynthesis
sscv00533
Glycosaminoglycan biosynthesis - keratan sulfate
sscv00601
Glycosphingolipid biosynthesis - lacto and neolacto series
sscv01100
Metabolic pathways
Module
sscv_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
sscv_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
125988919 (b4galt3)
00513 Various types of N-glycan biosynthesis
125988919 (b4galt3)
00515 Mannose type O-glycan biosynthesis
125988919 (b4galt3)
00514 Other types of O-glycan biosynthesis
125988919 (b4galt3)
00533 Glycosaminoglycan biosynthesis - keratan sulfate
125988919 (b4galt3)
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
125988919 (b4galt3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sscv01003
]
125988919 (b4galt3)
Enzymes [BR:
sscv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
125988919 (b4galt3)
2.4.1.90 N-acetyllactosamine synthase
125988919 (b4galt3)
Glycosyltransferases [BR:
sscv01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
125988919 (b4galt3)
Glycolipid
125988919 (b4galt3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
125988919
NCBI-ProteinID:
XP_049610695
LinkDB
All DBs
Position
2:complement(22276551..22288544)
Genome browser
AA seq
429 aa
AA seq
DB search
MACCGRSLGSPCTLALLVGFQFAFVLYFSLGGFKGLVSVLVHTTEQEFDYSRPHDVYTNL
SHLRAPPPPPRNAGTGPPVTGPPLASCQIVSPLLVGPVSVHLSSPLTLEEIRIKNPLVLP
GGHYRPPDCAPRHHTAIVVPYRNRQTHLRALLYHLHPFLQRQQIHYSIYIVQQWGNGTFN
RAKLLNVGVREALRDEEWSCIFLHDVDLLPENDHNTYTCHKQFPTHLSVAMDKFKYRLPY
PQYFGGVSAVTPDQYMKMNGFPNQYWGWGGEDDDIAARVRLSGMKIVRPPVAVGHYKMIR
HRGDQGNEQNPHRFDLLKRTRLNWRSDGFNSLTYELLSKEEEPLYTNLTVNIGEEPHHPQ
GKTATPVHLRSASKTEATDNHEPKSPESKRPVVLNVTVTRPDGMKAEAPQTKAAIEMTQE
KAKVHASHL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcctgctgcgggcgctctctgggttccccgtgcacactggccttgctggtgggcttc
cagtttgcctttgtgctctatttctcccttgggggcttcaaaggtttggtgtccgtcttg
gtgcacaccacagagcaagagtttgactattcgcgaccccacgacgtctacaccaacctc
agtcatctgagagcaccgcctcccccacctcgcaatgctggcactggacctcctgtgacg
gggccaccactagcaagctgccagattgtgtcccctctgttagttgggcccgtatctgtc
catctttcctcacctctgacattggaggagatcagaataaagaacccattggtgttgcca
ggcggacactaccgtcctccagactgtgcaccccggcaccacactgccatcgtggtccca
taccgaaaccggcagactcacctccgtgctctcctctaccacctccatcctttcctgcag
aggcaacaaatccactacagcatctatatcgtacagcagtgggggaatggtacattcaac
cgagccaagctgctgaatgtcggtgtgcgggaagcccttcgagatgaggaatggagctgc
atcttcctccatgatgttgacctgctgcctgagaacgaccacaatacctacacttgccac
aagcagtttccaacacacctgtctgtggccatggacaagttcaaatacaggctaccatac
ccacagtattttggtggggtttctgcagtgactccagaccagtacatgaagatgaacggc
ttccccaatcaatattggggctgggggggagaggatgacgatattgcggcaagagtgcgt
ctgtctggcatgaaaattgtgcgccccccagtggccgttggtcattacaaaatgatcagg
catagaggagaccaagggaatgagcaaaacccacacagatttgacctcctgaaaaggacc
agactcaactggcgctctgacggcttcaactccctgacttatgaactcctctctaaagaa
gaggaacctctctacactaacctcactgtcaacatcggagaagagccccaccaccctcag
ggtaaaacggccacccccgtgcatctacgtagcgcctccaagacggaagccacagataat
catgagcccaagtctccagagagtaaaagacctgtggtcctaaatgtcactgtgacaaga
cctgatggcatgaaggcagaagctcctcaaacaaaggcagctattgaaatgacccaggag
aaagcaaaagtgcatgcgtctcacctgtag
DBGET
integrated database retrieval system
