Syngnathus scovelli (Gulf pipefish): 125989049
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Entry
125989049 CDS
T08785
Symbol
itchb
Name
(RefSeq) itchy E3 ubiquitin protein ligase b
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04120
Ubiquitin mediated proteolysis
sscv04144
Endocytosis
sscv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125989049 (itchb)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125989049 (itchb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125989049 (itchb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125989049 (itchb)
04121 Ubiquitin system [BR:
sscv04121
]
125989049 (itchb)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125989049 (itchb)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125989049 (itchb)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
HECT type E3
125989049 (itchb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
125989049
NCBI-ProteinID:
XP_049610972
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All DBs
Position
2:complement(16763527..16777954)
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AA seq
889 aa
AA seq
DB search
MASEVPKAGSSNGYPMKAQLQITVLSAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNT
HSPKWKQPLTVIVTPFSKLVFRVWSHQTLKSDIVLGMAKLDISATLKSNNMKISDVVQTI
QLCTDRDQREVVGDLSVCLDGMTVDPEMFAKAEVAHQNLSNGESRSNGEHTPRHSRDSSP
ALDSVDHRSSPRGRRSGTTSGSPLVSTGSVRPLRPPRPSRPPPPTPCRPTSSPASSSNSS
TPAESSNGPSGSETPVRAAVPGPSATPDCSPSINSNRNTPTVPSTSGPPATRQPMSTIGT
GASSRVPAANSGPLPPGWEQRIDQHGRLYFVDHVEKKTTWERPDPLPPGWERRVDQMGRV
YFVDHITRTTTWQRPTVETVRSYEQWQHQRSQLQGAMQQFNQRFIIGGQDQATASQNKEY
DPLGPLPNGWEKRTDSNGRVYFVHHPTRSTQWEDPRSQGLLNEKPLPEGWEMRFTVDGIP
YFVDHNRRTTTYIDPRTGKSSLENGPQITYVRDFKAKVQYFRFWCQQLAMPQHIKINVSR
KTLFEESFQQIMSFNAQDLRRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEY
AGKENYGLQINPASSINPDHLKYFKFIGRFIAMALFHSKFIDTGFSLPFYKRILNKPLAL
KDLESVDPEFYNSLIWIKDNNIEECGLEMFFCVDKEILGEITTHDLKPEGGEIQVTEENK
EEYIRLVAEWRLSRGVEEQTQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLADWQ
RNTIYRHYARGSKQIMWFWQFIKEMDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKF
CIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKMMFAIEETEGFGQE
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgaagtccccaaggcaggcagttccaatggttaccctatgaaggcacagctg
caaattactgtgctatcagcaaaacttaaagaaaacaagaagaactggtttggtcccagt
ccttatgtggaagttactgttgacggccagtccaagaaaaccgaaaaatgcaacaacact
cacagtcccaaatggaagcagccactcacggtgattgtgactcccttcagcaaactggtg
tttcgagtgtggagccaccaaaccctgaagtccgacattgtgcttggtatggccaagttg
gacattagtgccacactcaaatctaacaacatgaaaatctctgacgtggtgcagaccata
cagctgtgtacagaccgagaccagagggaggtagtgggagacctttctgtctgcctggac
ggaatgacagttgaccctgaaatgtttgccaaggctgaagtcgcccaccagaatctgtca
aatggagaatcccgttctaatggagaacataccccaagacacagccgagatagttcccct
gctttggacagcgtagaccaccgctcatctccccggggtcgacggtcagggaccacctct
ggttctcctctggtctcgacaggaagcgtgcggcctttgcgaccacccagaccctccaga
cctccacctccaaccccgtgcaggcccacctcttctccagcatcctccagcaatagctct
acaccggcagaaagcagcaatggtccgtcgggttcagagacacctgtgcgtgctgctgtc
ccagggccctcagcaaccccagactgcagtccttcgataaattcgaacaggaacactcca
actgtaccatctacctctggacctccagcaaccagacagccaatgagcaccattggcact
ggtgcctcatccagagtccctgcagccaactctggacctttgcctcctgggtgggagcag
aggatagatcagcacggcaggttgtattttgttgaccatgtagaaaagaaaacaacatgg
gagcgccctgatcccttacccccaggctgggaacgtcgtgttgaccagatgggccgcgtt
tactttgtcgaccacattacacggaccaccacgtggcagcgtcccacagtggagactgtg
cgcagttatgaacagtggcagcaccagcgcagccagctgcaaggagccatgcaacagttc
aaccagaggtttataattgggggacaggaccaggcgacagcctcacaaaataaggagtat
gatcctcttggacctctgccaaatggatgggagaagagaaccgacagcaatggaagagtg
tattttgtgcatcatcctacacggtcaactcaatgggaagacccacgatcacaagggttg
ttgaatgaaaagccacttccagaaggatgggagatgaggtttactgtcgatggcattccc
tattttgtagaccacaacaggagaactaccacctacattgacccccgcaccggaaaatcc
tcacttgaaaatggacctcagatcacctacgtcagagacttcaaagccaaagtacaatac
ttcagattttggtgccagcaactggccatgcctcaacacatcaagatcaacgtgtcacgg
aaaactctgtttgaggaatccttccagcagataatgagcttcaacgctcaggatttgcga
agaagactttggattatcttccctggagaagaaggcctggactacggaggtgttgccagg
gaatggtttttcctgttgtcccatgaagtattgaaccccatgtactgcctttttgaatat
gctggaaaagaaaactacggtcttcagatcaaccccgcctcttccataaatcctgaccac
cttaagtatttcaagttcattggccgcttcattgccatggcacttttccacagcaagttc
atagacacgggtttctcactgccattttacaagcgtatcttgaacaagcctttggccctc
aaagacctcgagtcagtcgacccagagttctacaactccctcatttggatcaaggacaac
aacatcgaagagtgcggcctggaaatgttcttttgtgttgacaaggaaatcctaggggaa
atcaccacgcatgacctgaaacctgagggaggggagatccaagtaacagaggagaacaag
gaggagtacattaggctggtagcagagtggaggctgtctagaggagtggaagagcagacc
caggcattttttgaaggcttcaacgaggtcctcccacagcagtacctgcagtattttgat
gccaaagagctggaagtgatgctttgtggcatgcaggagattgaccttgcagactggcaa
agaaataccatctacagacactatgcccgtggcagcaagcagatcatgtggttctggcag
ttcataaaagagatggacaatgagaagaggatgaggctgcttcagtttgtcactggtacc
tgtcgtcttcctgtcggaggctttgccgacctcatgggaagcaacggtccccagaaattc
tgtattgagaaggtgggaaaggaaaactggcttcccagaagtcacacatgtttcaacaga
ttggacttgccaccttataagagctatgaacagctgaaggagaagatgatgtttgccatt
gaggaaacagaaggctttggacaagagtga
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