Syngnathus scovelli (Gulf pipefish): 125989139
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Entry
125989139 CDS
T08785
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125989139
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
125989139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
HEAT_2
Atx10homo_assoc
Nipped-B_C
Motif
Other DBs
NCBI-GeneID:
125989139
NCBI-ProteinID:
XP_049611141
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MLAEPLRSAMTVGKVDDTSLAVPSDARLHTGAHRVLDQVQTIKRSKSKHGKNGTPTSPTL
PPLSPLDEFGTFQFLPSKANGTFGRSVSTKTTAFNKAQYAHKSRTLSTKSLGARHLSTSG
AWEQQLNAANWPQNPAGMKPSRSDPALAPANNRRVKGQTTQVKRLSSYSTSNGFHTGMGQ
QRYLEAPPDQSHAIKTSKIVQQSGLNGSSDLTIKEAVEFLSHPEENFQQCGATIIQQTTF
KDDRAKQEVLQLGGIPTLVSLLRSPNPAVSLAAAGALRNLVFKDHKNKQQVQQCGGIAKA
LQLLKETECSETQKQITGLLWNLSSADELKGELIATALPALTENVVVPFTRWSDDSASNN
IHPEVFYNTTGCLRNLSCAKLRERTAMRDCRGLIDSLMSYLQSCVADNNPDDKSVENCAC
ILHNLTYQLESESPKCFADFIPSTESQSGRKSPTVGCFSPKSGKVQKEFSFENIRGMLDD
IDPKGAKWLCHPKAMQTYLSLLSSSKKDATLEACCGALQNLTASKHLGSGAMSQILVQKC
GALMHIIPLLRSPKPSLQKAAVSLLGNIGRTSGLQTTMAKQVLPELTGLLSAGPQELGNN
DESLATVCNTVRNLMMVDTEVNKKFIDGDLVSSVAELSGNRSLPKASKAASVLLYHFWND
KNLQNILKKLGMSKSLFVNDYTTAAYRSVQIIE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcggagccgctgcgttcggccatgacggtcgggaaagtggatgacacctcgctg
gctgtgccgtcggacgccaggctgcacacgggagcgcaccgggtgctggatcaagtgcag
accatcaagaggagcaagtccaaacacggaaagaacggcactcctacaagccctactttg
cccccattgtcaccactggacgagtttggaacattccagtttttgcccagcaaagccaat
ggcactttcggtcgtagtgtctccaccaagacgacagcgttcaacaaagcgcaatatgcc
cataagagtcgaactctgtccacaaaaagcttgggagcgagacaccttagcacgtctggc
gcatgggaacaacaactcaatgctgccaactggcctcaaaatcccgccgggatgaaaccc
agccgcagcgatcccgccttggctcctgcaaacaacaggcgagtcaaagggcagaccacc
caagtgaagagacttagctcttactccaccagcaacggcttccacacgggtatgggccaa
caacgatatttggaagctcctcccgatcagtcgcacgccatcaaaacgtccaagattgtt
cagcaatcaggcctcaacggttcgtcggatttgaccatcaaggaagctgtggagttcttg
tctcaccccgaggagaatttccagcagtgcggcgccaccatcattcagcaaactactttt
aaagacgatcgtgccaaacaagaggttctccagcttggagggatccccactctggtgtct
ctgctgcgcagcccaaatcctgctgtgagcctggccgccgctggggccttgaggaacctg
gtcttcaaggaccacaagaataagcagcaggttcaacaatgcggcggtatcgccaaagcc
ctgcagttactcaaggagacggaatgtagcgagacgcagaagcagatcacaggcctgctt
tggaacttgtcttctgccgacgagctgaagggagaactcatagccacggcgctgcccgcc
ttgaccgagaacgtggtggtgccgttcacacgctggtcggacgacagcgcctccaacaac
atccatcctgaagtcttctacaacaccacggggtgcctgcgcaacctgagctgcgctaag
ctgcgggagaggacggccatgagagactgccgcggacttatcgattcgctcatgagctac
cttcagtcctgtgtggctgacaacaaccctgacgacaagtctgtggagaactgcgcatgc
atcctccataatttgacctaccagctggaaagcgagtcccccaagtgctttgccgacttc
atcccttcgacggagagccaatccggcaggaaaagccccacggtcggatgcttcagccca
aagagcggcaaggttcaaaaggagttttcgttcgaaaacattcgaggaatgctggatgac
attgacccgaaaggtgccaagtggttgtgccatcccaaagctatgcagacctacttgtct
ctgctcagctcgtcaaagaaggacgccaccttggaggcctgctgtggtgcgctgcagaac
ttgactgccagcaaacatcttggttcaggtgccatgagtcagatcctggtccagaagtgt
ggggctctgatgcatattatccctctgttgaggtcacctaagcccagcctgcagaaggcc
gctgtgtccctgctaggcaacattggtcgaaccagcggcttgcagaccaccatggcaaag
caagttttgccggagctcaccgggcttctctctgctggcccccaagaactgggcaacaac
gacgaaagcttggcgacagtttgcaacactgtccgtaatctgatgatggtggacacggag
gtcaacaagaagtttatcgatggggatttggtgtcatcggtggccgagctcagtgggaat
aggtctttacccaaagccagcaaagcagcctccgtgctcctctatcacttttggaatgac
aagaacttacaaaacattttgaaaaagctaggaatgagcaagtcattattcgtcaacgac
tacaccacggcggcgtacaggtcggtgcagattatcgagtga
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