Syngnathus scovelli (Gulf pipefish): 125990104
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Entry
125990104 CDS
T08785
Symbol
actc1a
Name
(RefSeq) actin, alpha cardiac muscle 1a
KO
K12314
actin, alpha cardiac muscle
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04260
Cardiac muscle contraction
sscv04261
Adrenergic signaling in cardiomyocytes
sscv04814
Motor proteins
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125990104 (actc1a)
04820 Cytoskeleton in muscle cells
125990104 (actc1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
125990104 (actc1a)
04261 Adrenergic signaling in cardiomyocytes
125990104 (actc1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125990104 (actc1a)
04147 Exosome [BR:
sscv04147
]
125990104 (actc1a)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
125990104 (actc1a)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125990104 (actc1a)
Exosomal proteins of bladder cancer cells
125990104 (actc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
125990104
NCBI-ProteinID:
XP_049612793
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All DBs
Position
20:8855460..8857871
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AA seq
377 aa
AA seq
DB search
MCDDDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETAYNSIMKCDIDIRKDLYANNV
LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
KQEYDEAGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgacgacgagaccaccgcccttgtgtgcgacaacggttctggcctggtcaag
gctgggtttgccggtgatgatgctccccgtgctgtcttcccatccattgttggacgcccc
cgtcaccagggtgtgatggtgggtatgggtcagaaggacagctatgtgggagacgaggcc
cagagcaagagaggtatcctgactctgaagtaccccatcgagcacggcatcatcaccaac
tgggacgatatggagaagatctggcatcacactttctacaacgagctccgtgtggcccca
gaggagcaccccaccctgctgacagaagccccccttaaccccaaggccaacagggagaag
atgacccagatcatgtttgagaccttcaacgtccctgccatgtatgtggccatccaggct
gtcttgtccctgtacgcctccggtcgtaccaccggtattgtactggactccggtgatggt
gtgacccacaacgtgcccatctatgagggttacgctcttccccacgctatcatgcgtctg
gatctggccggtcgggacctgactgactacctgatgaagattctcactgagcgtggctac
tccttcgtcaccaccgctgagcgtgagatcgtgcgtgacatcaaggagaagctgtgctac
gtggctctggactttgagaacgagatggccacagctgcttcttcctcttctctggagaag
agctacgagcttcctgacggtcaggtcatcaccatcggcaatgagcgtttccgctgccct
gagaccctcttccagccatccttcattggtatggagtcggctggtatccatgaaaccgcc
tacaacagcatcatgaagtgtgacattgatatccgcaaggacctttacgccaacaacgtc
ctgtccggtggtactaccatgtaccctggtatcgctgatcgtatgcagaaggagatcaca
gctctggcccccagcaccatgaaaatcaagatcattgcgccccctgagaggaaatactcc
gtctggatcggtggctccatcctggcctctctgtccactttccagcagatgtggatcagc
aagcaggagtacgatgaggcgggcccctccatcgttcacaggaagtgcttctaa
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