Syngnathus scovelli (Gulf pipefish): 125990403
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Entry
125990403 CDS
T08785
Symbol
ncoa1
Name
(RefSeq) nuclear receptor coactivator 1 isoform X1
KO
K09101
nuclear receptor coactivator 1 [EC:
2.3.1.48
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125990403 (ncoa1)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
125990403 (ncoa1)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
125990403 (ncoa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_NCOA
Nuc_rec_co-act
PAS
SRC-1
PAS_9
PAS_3
HLH
Motif
Other DBs
NCBI-GeneID:
125990403
NCBI-ProteinID:
XP_049613500
LinkDB
All DBs
Position
20:10367999..10382342
Genome browser
AA seq
1486 aa
AA seq
DB search
MSAVGESPLDPDTAESRKRKGSPCDTSAQSLEKRRRELESRYIGELAELLSSNMADIASL
SAKPDKCHILKSTVDQIQQMKRRELEKAALCSPDDAVQKSDISSSSQGLLEKEALGPMLL
EALDGFFFVVNREGRIVFVSENVISYLGYPQEELMMSSVYSILHVGDHNEFVRNLLPKSL
VNGGAPWPQESSRRSSHSFNCRMLKRPPDEMDSENQEARQQYEIMQCFTVSQPRAAVQEE
GDDLQSCLICIACRTPRAQPVSTESFITKQDPTGKIISIETSALRATGRAGWEDLVRKCI
YAFFQPQGKEPSHAKKLLHEVMSHGTAISPLYRFALSDGTPLSAQTRCKFCCPPNPDVQP
FILGIHTIDREHNTGSSQENTNPSLQPTLGNLAQAPSRSPVFAAGSNSKQTSGPVATASS
APSASTGLPAGNNSVSPQRLNPAAGYPPPGRTRPQQGSSPSPLSSPATAAPTSFMSRASP
GLAESPRVPGLHSPAGALNRQHSGGDASNAAQAGSKACLSRQAGTPTGFSSPGPGAEGGV
EDSVKAPPPSVAAHLRLNQPLDSNGTGSDTSDVHRTSLPHPKPSPGPQCPASHSTLTERH
KILHRLLQDSSDSSASASASEDGRGEVEIKKEPPSSPVVSAGLQRSTSREPQDHQLLRFL
LDTDEKDLGDLPPPSALSLQTVRVKVEKRGGGEGCAAAVASGPASKTSSSASVSPKSSPV
GERRRDSRRDSRRDSRDSMMSGGTSDTEPLAQPTPALRGSNVAKQGGADDAGAPGGGPQL
HSPAPQTPAQLQSPGPPLQSPLSQSRLQSPSPQLHSPSPKLKLQSPTQAQPGGISVKREL
PSTPNRGNVEGGLASGCNPPNQSAFDFCGPLTPSQAQGTGHVDLFQAPKDSGSPFPEAEI
ANPFSSSTGPSKLDLADSQFQPLSLNDSQFQPLSLTDSLSFDALGTPLQAPFTSPQEQCV
PCTLDEVLGPPTTAEARNDEKALLEQLVSFLSGTDESELAELDKALGIDKLVQGGCYDPL
PQNFPTQQVTANPLPSYPPQFAPPAQFAAELGQQQAPGYGPPRGTFLGRAPGAVAGLRPQ
GMPRPPQGMAAQLRLPPNQLRLQLQQRLQGPQQLQNRLAMNSFPVGAGGGQHVNMAVRLG
APQPQIPSQPPLNAQMLAQRQRELYSIQHRQRQLFQQKVMLMRQNMAGAAAPAATPAVAR
LPKGDNASASQQQAQFNFPAGYGPVPGNPPTSPGHFSGGPVPGGAPTPLDGKMSSQTALL
GGVPAPPFGGGPSLQQQGLMQQFGAAAVQPDSPFPPELSPGSPLLSPQNSTSQSPMLQQA
PPPSYQSPDMKSWPPASNSLFSPSSQHSGGQTFGQQGVYNNMSITVSMAGSSAGAGPLPS
LGQPGGGGGMTSLCSDQQVRTEPTNKVILNRRCVASKRANVFSQAQQVQQVQVFADVQCT
VNLVGGDSYLSQGSAAGAGPKAPGPPSGGQSSQAQQKSLLQQLLTE
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgtcggggaaagtcccttggaccctgacacggccgagtcacgcaagaggaaa
ggctcgccatgcgacacgtcggcgcaaagcctggagaagcggcggcgcgagctggagagt
cgctacatcggcgagctggccgagctgctctcctccaacatggccgacatcgccagtctc
agcgccaagcccgacaagtgccacatcctcaagagcaccgtggaccaaatccagcagatg
aagcggcgcgagctggaaaaagcagctctttgctctccggacgacgccgtgcagaagagc
gacatctcctccagtagccagggcctgctggagaaagaagccctcggacccatgctgctg
gaggctctggacggcttcttcttcgtggtaaaccgcgagggccgcatcgtgtttgtctcg
gagaacgtgataagctacctgggctaccctcaggaggagctgatgatgtccagcgtctac
agcatcctgcacgtgggagaccacaacgagtttgtccgcaatctgctgcccaaaagtctg
gtgaacggcggcgcgccttggcctcaggagtccagccgcaggagcagccacagcttcaac
tgccgcatgctgaagaggccgcccgacgagatggactcggagaaccaggaggcccggcag
cagtacgagatcatgcagtgctttaccgtgtcgcagcctcgcgccgccgtgcaggaggag
ggcgatgacctgcaaagctgcctgatctgcatcgcctgccggacgcctcgggcccagccc
gtcagcacggagtcttttatcaccaagcaggaccccacaggaaagatcatctccatcgag
accagtgcattgcgggccaccggccgggccggctgggaggacctggtccggaagtgcatc
tacgccttcttccagccgcagggcaaggagccctcccatgccaaaaagctgctacatgag
gtgatgagccacggcaccgccatcagcccgctgtaccgcttcgccttgagcgacggcacg
ccgctcagcgctcagacccgctgcaagttctgctgcccccccaacccagacgttcagccc
ttcatcttgggcattcacactattgacagggaacacaacactggtagctctcaggaaaac
actaaccccagccttcagccaaccctgggcaacttggcccaggcgccctcacgctcgcca
gtcttcgctgctggcagcaactcaaaacaaacctcaggccccgtcgccaccgcctcctcc
gccccctccgcctcaacgggacttcccgccggcaacaacagcgtctccccccaacgactg
aacccggccgccggctacccgccgcccggccggacgcgtccccagcagggcagcagcccg
tcgcctctcagcagccccgccacagccgcccctacctcgtttatgtcgcgggccagtccc
gggctggccgagagcccgcgggtgccgggcctccactcgccagcgggtgcactgaacaga
caacactctggcggcgacgctagcaacgccgcccaggccgggtcaaaagcatgcttgtcc
agacaagccgggacccccaccgggttctcctctcccgggccaggagcggagggtggggta
gaggactctgtcaaagcccccccgccctctgtcgcggctcatctcagacttaatcagccg
ctggacagcaacgggacaggaagcgacaccagcgacgtccaccgcacctcgttgcctcat
cctaaaccttctcccggccctcagtgtcccgcctcccacagcacactgacggaacgtcac
aagatcttacaccgactgctccaagacagcagcgactccagcgcctccgcctcggcctcc
gaggacggcagaggcgaggtggagatcaagaaagagccaccatccagtcccgtggtgagc
gccgggctgcaacgctccacttccagagagccgcaggaccaccagctgctgcgctttctg
ctcgacaccgatgagaaggacttgggagacctgcctcctccatctgctctcagcctgcag
acagttcgggtgaaggtggagaagcgaggcggcggggagggatgcgcggccgccgtggct
tcgggccccgcctccaagacctcctcctcggccagcgtcagccccaaatccagccccgtg
ggggagaggaggcgagacagccggcgagacagccggcgggatagtagagactccatgatg
tccggcggcacctccgacacggagcccctcgctcagccgacgcccgccctcagaggctcg
aacgtggccaagcagggcggcgccgacgacgcgggcgcccccgggggaggccctcagctc
cactctccggccccccagaccccggcgcagctccagtcgccggggcctccgctgcagtct
ccgctgtcgcagtcccgcttgcagtcgccgtcgccgcagctccactcgccctcccccaag
ctaaagctgcagtcgcccacccaagcgcagcccggcggcatcagtgtgaagagggaactg
cctagcactcccaacagaggcaacgttgaaggcggcctcgcttcaggctgcaatcccccg
aatcagtcggccttcgatttctgcggccccctgactccgagccaggcccaaggaacggga
cacgtggacctcttccaggcccccaaagacagcggcagtcccttccctgaggctgaaatc
gccaacccgttcagttcaagcactggcccgtccaagttagatttggccgactcgcagttc
cagccgctgtctctgaacgactcgcagttccagcctctgtctctgaccgactcgttgtcc
tttgatgccctgggaacgccactgcaagcgccttttacctcgccacaagagcagtgcgta
ccttgcacgctggacgaagtcctgggtcccccgaccacggccgaggcccggaatgacgag
aaggctctgctggagcagctggtctccttcctcagcggcactgatgaaagtgaactggcc
gagctggacaaagctctggggatcgacaaactggtgcagggcggctgctacgacccgctg
ccccagaacttcccgactcagcaagtcactgccaacccgctgccatcctaccctccccag
tttgcgccgcccgctcagttcgcggcagagctggggcagcagcaggcgccgggctacggg
cccccccgggggaccttcctcggcagggcccccggcgccgtggcgggcctccgtccgcag
gggatgccccggccgccgcagggcatggccgcccagctcaggctgccgccaaaccaactg
cggctgcagctccagcagagactccagggtccacagcagcttcagaaccgtctcgcgatg
aattcgttccctgtcggagcaggaggtggccagcacgtcaacatggccgttcgtctgggg
gcgccgcaacctcaaataccttcgcagcctccgctaaacgcgcagatgctggctcagcgt
cagagagagctgtacagcatccagcaccgccagcgtcagctttttcagcagaaggtcatg
ctgatgagacagaacatggcaggcgccgccgccccggccgccaccccggccgtcgccagg
ctgcccaaaggcgacaacgcgtccgcgtctcagcaacaggcgcagttcaacttccccgcc
ggctacggcccggtgccggggaatcctcctacctcacccggtcacttcagcggcggcccc
gtgccgggaggggcgcccacccccctggacggcaaaatgagtagccagacggcgttgctg
ggcggcgtgccggctccgcccttcggtggcggtccctcattgcagcagcaagggctgatg
cagcagtttggggcggccgcggtccagccggactcgcctttccctcctgagctcagcccc
ggcagtccgctcttgtcgcctcagaactccacttcccagagtcctatgctccagcaagcc
ccgccccctagctaccagtctccagatatgaagagctggccaccagccagcaacagcctg
ttcagtccgtcgtcgcagcacagcggggggcaaacgttcggccagcagggggtctacaac
aacatgagcatcaccgtgtccatggcggggagctcggccggcgcgggccccttaccgtcc
ttggggcagcccggcggcggcggcggcatgacctcgctgtgcagcgaccagcaggtcaga
acagaaccgaccaacaaagtgattctgaatcgccgctgcgttgcgtccaaacgtgcgaat
gtgttttcgcaggcccagcaggtgcagcaggtgcaagtgtttgccgacgtccagtgcacc
gtcaacctggtgggcggcgactcctacctgagtcagggctcagccgccggcgccggcccg
aaggctcccggacctccgtcgggcggccagagcagccaggcccagcagaagagcctcctc
cagcagctgctcaccgagtga
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integrated database retrieval system
