Syngnathus scovelli (Gulf pipefish): 125990912
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Entry
125990912 CDS
T08785
Name
(RefSeq) voltage-gated potassium channel KCNC1 isoform X1
KO
K04889
potassium voltage-gated channel Shaw-related subfamily C member 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125990912
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
125990912
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GFIT
Motif
Pfam:
Ion_trans
BTB_2
Ion_trans_2
Shal-type
BTB_3
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
125990912
NCBI-ProteinID:
XP_049614248
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Position
21:6905564..6934238
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AA seq
657 aa
AA seq
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MLSSVCVSSFKGRKGGNKSSNKACYSADMTCPSESEKIVINCGGVRHETYRSTLKTLPGT
RLSWLTEPDAFSNFDYDPKLDEFFFDRHPSVFSFILNYYRTGKLHCPNDVCGPLFEEELA
FWGIDETDVEACCWMNYRQHRDAEEALDSFETPEPDAPDDDPALGGADGDLKRLCMQEDA
RRAGWWKTWQPKIWALFEDPYSSKYARYVAFGSLFFILISISTFCMETHEAFNTILNKTE
NVTVGNQTREEIVYEVVTDSWLTYVEGVCVIWFTIEVLLRVIFCPDKVEFFKSTLNIIDF
VAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTN
EFLLLIIFLALGVLIFATMIYYAERIGAHPDDPAANAHTNFKNIPIGFWWAVVTMTTLGY
GDMYPETWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKNKHIPRA
PQPGSPNYCKPDALAMATASPQRLLGNVLGGVMGSGGLGGDCPLAQEEIIEINRDSKQNG
DAASAALANEDCPTIDQVLSPDERSPIGRGPTRERYQQDRACFLLNTREFRATDGNVRKG
CVISRVSTSYENSRSLTNVTGVSGSSLRLAPITSPPFESYEAPGPLRRCRSPIPSIL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgctcagttcggtgtgtgtatcctctttcaaagggcgcaagggtgggaacaagtcgtcc
aacaaagcatgttacagcgcagacatgacttgtccgtcggaaagcgagaaaatcgtgata
aactgcggcggggtgcgccatgagacgtaccggagcaccctgaagaccttgcccggtacg
cgcttgtcgtggctgaccgagccggatgccttcagcaactttgactacgaccccaaattg
gatgagttcttcttcgaccgccacccgtccgtcttctccttcatcctcaactactaccgc
acgggtaagctgcattgtcccaacgatgtctgcggccccctcttcgaggaggagctagcc
ttctggggcatcgacgagacggacgtggaggcgtgctgctggatgaactaccgccagcac
cgtgacgcagaggaggcgctggacagctttgagacacccgagcccgacgcgcctgacgac
gacccggccctggggggcgccgatggggacctgaaaagattgtgcatgcaggaggatgcc
aggagggcgggctggtggaaaacctggcagcccaagatctgggcgctcttcgaggacccc
tactcgtccaaatacgctcggtatgtggcgtttggctccctcttcttcatcctcatctcc
atctccactttctgcatggagacgcatgaggccttcaacaccatcctcaacaagacagag
aacgtgacggtgggcaaccagacccgcgaggagatcgtctacgaggtggtgaccgacagc
tggctgacgtacgtggagggcgtgtgcgtcatctggttcaccatcgaggtgctcctgcga
gtcatcttctgccccgacaaagtggagttcttcaaaagcaccctcaacatcatcgacttt
gtggccatcctgcccttctatctggaggtgggcttgagcgggctctcctccaaagccgcc
aaggacgtcctggggttcctccgcgtggtgcgctttgtccgtatcctccggatcttcaag
ctgacccgccactttgtgggtctgcgagtgctcggccacaccctccgcgctagcaccaac
gaattcctcctgctcatcatcttcttagcgctgggcgtcctcatcttcgccaccatgatt
tactacgcggagaggatcggagcccacccggatgacccggcggccaacgcccacactaac
ttcaagaacatccccatcggtttctggtgggccgtggtgaccatgaccacgctgggctac
ggagacatgtacccggagacctggtcggggatgctggtgggggctctgtgcgccttggcc
ggcgtgctgaccatcgctatgcccgttcccgtcatcgtcaacaacttcggcatgtactac
tcgctggccatggccaaacaaaagttgcccaaaaagaagaacaaacatattcccagagcg
cctcaaccggggtctcccaactactgcaaaccggacgctctggccatggcgactgcctcg
ccgcagaggctcttgggaaatgtcctaggtggcgtcatgggatccggaggcctcggaggt
gactgtcctctcgcccaagaagaaattatagagatcaacagagattccaagcagaacggc
gatgctgcctcggccgcgctggccaacgaagactgccccaccatcgaccaggtgctcagc
cctgatgagaggagcccaatagggcggggtcctactcgggaacgctaccaacaggaccgg
gcctgcttcttactcaacaccagggaattccgagccacggatgggaatgtgcggaaaggt
tgtgtcatatcacgcgtgtctacgagctatgagaattctcgcagtctgacgaacgtgacg
ggggtgtcaggctcgtctctgcggttagctcccatcacgagcccgcctttcgaaagctac
gaggcgccgggcccgttacgccgctgccgttcccccatcccttccattttgtag
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