Syngnathus scovelli (Gulf pipefish): 125991079
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Entry
125991079 CDS
T08785
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04140
Autophagy - animal
sscv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125991079 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125991079 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125991079 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125991079 (plekhm1)
Membrane trafficking [BR:
sscv04131
]
SNARE
SNARE associated proteins
Others
125991079 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
125991079 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
125991079
NCBI-ProteinID:
XP_049614545
LinkDB
All DBs
Position
21:complement(6532786..6538168)
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AA seq
983 aa
AA seq
DB search
MLATHTPEAPQEAKHVKQIKEKLALSLKSLQRRYVTSDSVVTSEDGDANLLCCALEAIFV
HGIKSKYVRWEARKGESGPLPQPFFWNLLKTVTHRDVITELEKINFVGTDVGRCRAWLRL
ALNHGLLECYLLSLFRESAKLRAHYQPGALLLNGEEREVLLSYLQGLASLTFNLSYKSAV
LNQWTTTPLSLAGLCAPSPVNSPEAPLNGVACKDSWDTLSESSGSTDTGPPLLWASRGSR
GGTGALNSSTLSLDTAGSSQLSSSSSSDSLLQGQEHRSPASEQWSSCDIRTKAPLKASPP
KQQENSSQDSMREDSFVSSSGADHFSDSDQPPSSALSDVEPPAPPLADPPSPRRNHVDRV
QPAATTVPEKAKLDRREKGVENVLCLEVSSDSLTHSRSWISEEDIYKPRVESEPDCEAPP
SPPPPLAPLPAPPESSQLPPSVVHRRQIGLSNPFRGLLKLGHLERRGAMGMWRDHYCELS
PLEFCLYLNAEERTCCDNCSLLRCEDARLTSPDGRFELAFPGKRLYLRAANRDEAEDWVD
RVVEAVNKCRPMSHVEEQWEILEMPGENGAEVGSVSFPCSASCSPERCASPPPPKEFNWT
RTADLERDAIKEAVLYCCSSADAHSWVPLVFSLSLEALKGFRVQEGSKLLQMAFAIQEVR
DVVPDVALGGPYFFKLLTLRETLRLRAESAEEACSWRALIRGALESYLESGEEAVAVGQN
LDGNLHRLVQHRLKEDGPLLVHLCTVPSQNGLDTQSFKCAGCSQQIGPSLGRARLCEFTG
QYYCDSCHRGDTTIIPSRMLHNWDLNKREVSRRAQWVLAQVEQEPLLNLEQLNPDLLTHS
ETMALVHNLRRRLRLLGEYLLTCRSGACKMLQARMEQRTYLLESSSLYSVRDLREIAENQ
YTLYLTSLCHFASSHVFSCNLCTQRGFICQMCRSDDIIFPFQFDSTTRCKECKAVFHRTC
MVPDQGCPRCLRMRKYLERDLQD
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgttagccacgcacacgcctgaagcgccgcaagaagctaagcatgtcaagcagatcaag
gagaagctagcgctgtcgctcaaatccctgcagaggcgctacgtgacatcggactcggtg
gtcaccagtgaggacggcgatgccaacctgctgtgctgcgcgctggaggccatcttcgtc
catggtatcaagagcaagtacgtccgctgggaggccaggaaaggagagagcggacccctc
ccgcagcccttcttctggaatctccttaagaccgtcacccatcgcgatgtgatcacagag
ctggagaagatcaacttcgtgggtacggacgtgggacgttgccgagcatggcttcgtctg
gccctcaatcacggtctgctggaatgctacctactgtcgctgtttcgggagagtgccaag
ctgcgggcgcactatcagcccggcgccctgctgctcaacggcgaggaacgcgaggtgctg
ctcagctaccttcagggcctggcctcgctcaccttcaacctctcgtacaagtcggccgtc
ctcaatcagtggaccaccacgccactcagcctcgccggactctgcgccccgtccccggtt
aactctccggaagcgcccctcaacggggtggcgtgcaaagactcatgggatacgctgtcg
gaatcgtcgggatcgactgacacggggccgccgctcttgtgggcttctcgagggtctcgc
ggtggtaccggagcgctcaactcgtccacgttgagcctggacaccgcaggctcttcgcag
ctctcctccagctcgagctcggacagccttctccaggggcaggagcaccgaagccccgcc
agcgagcagtggtcttcttgtgacatcaggaccaaagcacccttgaaagcgtcgccaccc
aagcagcaggaaaactccagtcaggattccatgcgtgaggactcctttgtctccagctcc
ggcgccgaccacttctccgacagcgaccagccgcccagttccgctctctccgacgtagag
ccgccggctccgcccctcgctgacccgccatcgccccgccgaaatcatgttgaccgtgtg
cagcctgccgccacgacggtcccagaaaaggcgaagctagaccgcagagagaaaggagtc
gagaacgtcctctgcttggaggtgtcatcagactccctcacgcactcacgctcctggatc
tccgaggaagacatctacaagccccgtgtggaatcagagccagactgcgaggcaccaccg
tcgccgcctccccctcttgctcctcttcctgctcctcccgaaagctcgcagttgccaccg
agtgttgtccatcgccgtcaaataggcctctccaaccccttccgaggcttgctgaagcta
ggtcacctggagcgccgtggcgccatggggatgtggcgagaccactactgcgagctgtcc
cccttggagttctgcctctacctcaatgcagaggagcgcacctgctgcgacaactgctcc
ctgctgcggtgcgaggacgcccggctgacctcgcccgacggccgcttcgagctggctttt
cccggcaagcgtctttacctgcgtgccgccaaccgggacgaggcggaggactgggtggac
cgcgtcgtggaggcggtcaacaagtgccggcccatgtcccacgtggaagagcagtgggag
attctggagatgcccggtgagaacggcgccgaggtcggcagcgtttccttcccgtgctcc
gcctcgtgcagccccgagcgatgcgcctcgccccctccccctaaggagttcaactggact
cgcacggcggatttggaaagggacgctatcaaagaagcggtgctgtattgttgctcgagc
gctgacgctcactcgtgggtgcctctcgtcttctcgctctccctggaggccttgaaaggc
ttccgggtgcaagaaggaagcaagttgctgcagatggccttcgccatccaggaagtccgg
gacgtggtccctgacgtggcgctgggcggaccctacttttttaaactcctaacgctcagg
gagacacttagactgcgggcggaaagcgccgaggaggcgtgctcctggagggctctgatc
cgcggggctctggagtcctacttggagagcggggaggaggcggttgccgtcggccagaac
cttgatggaaacctacatagactggtccagcacagactcaaagaagatggcccgctcctc
gtgcatttgtgcaccgtgccctcgcaaaatggactggacacgcagagcttcaaatgtgca
ggctgctcccagcagatcggcccatcgctgggacgagcccgcctatgcgagttcaccggc
cagtactactgtgactcctgtcaccggggcgacaccaccatcatcccttcacgcatgctg
cacaactgggacctcaataaacgcgaggtgtcgaggagggcgcaatgggtgctggctcag
gtggagcaggagcctctgctcaacctggagcaactcaaccccgacttgctgacacactcc
gagaccatggctcttgtgcacaacctgcggcggaggctgcggctactgggcgagtacctg
ctcacctgccgtagcggagcctgcaagatgcttcaagccaggatggagcagcgaacctac
ttactggagtccagcagcctgtacagcgtgagggacctgcgggagatcgccgagaaccag
tacaccctctatctgacgtcactgtgccattttgccagcagtcacgtttttagctgcaac
ctgtgcacgcagcggggcttcatctgccagatgtgccgcagcgacgacattattttccct
ttccagtttgacagcaccactaggtgcaaggaatgcaaggcggtgtttcatcggacatgc
atggtgccagatcagggttgtcctcgttgcctgcgaatgaggaagtatctggagagagac
ctgcaggactaa
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