Syngnathus scovelli (Gulf pipefish): 125994035
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Entry
125994035 CDS
T08785
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00310
Lysine degradation
sscv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125994035 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125994035 (prdm6)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125994035 (prdm6)
Enzymes [BR:
sscv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
125994035 (prdm6)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125994035 (prdm6)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125994035 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
125994035
NCBI-ProteinID:
XP_049619142
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All DBs
Position
3:21619206..21654046
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AA seq
596 aa
AA seq
DB search
MLKPGEASAAATAAASAFLKVDASSYLHHWQQLFPHTPLKPPLPAPSGPPHCTSSGAALA
PASSSSVVVAQLPLAQHMALYGQALAPVGPGGPGGDAVGVAPPAENPALGRLLQVKEQSC
GGVGVVSSSVKSVSGEEGGRTSTTVQTGGRMKLTAEELDYFLYGQQRMEIIPISSHNTDV
NNRCDMCADNRNGECPMHGPLHSLRRLVGTSSATPAPLTLPDVPDWLRELPREVCLCTST
LPGLGYGICAAQRIPQGTWIGPFQGTPLMLDKVRCGGSRNTRHLWEIYDSEGTLCHFLDG
NDPAKSSWMRYIRCARHCGEQNMMVVQYRSSIFYRACLDIPRGSELLVWYNDSYTSFFGI
PLQCVAQDENLNVPTSVSEVMSRQESLQQQQQQAPFGKSGKATASLSSSVRSMVFPQISC
SRGFSMLDKSGAPFPSSESSFGQLSSKNQRVLASPTSTSQLSSEFSDWHLWKCGQCFKTF
TQRILLQMHVCPQNPDRPYQCGHCSLSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGAT
TLNNHIRTHTGEKPFKCERCDRSFTQATQLSRHQRLPNECKPNSEGSVGGDSIEVD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggcgaggcatcggcggcggcgacggcggcggcgtcggccttcctcaaa
gtggacgcgtcgtcctacctgcatcactggcagcagcttttcccgcacacgccgctcaag
ccgcccctacccgcgccctcgggacccccccactgcacctcgtcaggggccgccctggcg
cccgcctcctcctcctccgtggtggtggcccaacttcctctcgcccagcacatggcgctc
tatgggcaggccctggctccggtgggccccgggggtcccggaggggatgcggtgggggtg
gccccccctgctgagaaccccgcgctgggacgcctgctgcaggtgaaggagcagagctgc
gggggcgtcggggtggtatcgtccagcgtgaagagcgtcagcggcgaggaaggcggcagg
acgtccaccaccgtgcagacggggggcaggatgaagctgaccgccgaggagttggactac
ttcctctacgggcaacagaggatggagatcatacccatcagcagccacaacaccgacgtc
aacaaccgctgcgacatgtgcgcggacaaccgtaatggcgagtgtcccatgcacggaccg
cttcattccctgcggaggctggtgggcaccagcagcgccaccccggcaccgctcactctt
cccgacgttcccgactggctcagagagctgccccgagaggtgtgtctgtgcaccagtaca
ctccccggtttggggtacggaatctgcgccgcccagagaattccccagggtacctggatc
ggacccttccagggcacccccctcatgctggacaaagtccgctgcggaggctccaggaac
acgcggcacttgtgggagatttatgactccgaaggaacgttgtgtcacttcctggatggc
aacgatccggctaaatcgagctggatgaggtacatccgatgcgcccgacactgcggagag
cagaacatgatggtcgttcagtacaggtcgagcatcttctaccgggcgtgcctggacatc
cctcgaggaagcgagctcctcgtttggtacaacgattcatacacttccttcttcggaatt
ccgctgcagtgtgtcgctcaggatgaaaacctgaacgtccccacgtctgtttcggaggtg
atgtctcgccaggagtccttacaacagcaacaacaacaagcaccctttggcaagagcggc
aaagccacggcgtccttgtcgtcgtccgtgcgctccatggtgtttcctcagatatcgtgc
agcagaggtttctccatgctggacaagagcggagcgcccttcccttcatccgagtcgtct
tttggccagctgtcctccaaaaaccaaagagtcttggccagtcccacgtccaccagccag
ctcagcagcgagttcagcgactggcatctgtggaagtgcggacagtgcttcaagaccttc
acgcagaggatcctgctacagatgcacgtctgtccgcagaaccccgacaggccgtaccag
tgcggccactgctcgctgtccttctcacagccatcggagttgcgcaaccacgtggtgacg
cactccagcgaccggcccttcaagtgcggctactgcggacgcgctttcgccggcgccacc
acgctcaacaaccacatacgcacgcacactggcgagaagcccttcaaatgcgagcgctgt
gatcgcagtttcactcaggccacccagctgagccgtcaccagagattacccaacgaatgt
aaacccaacagcgagggatcagtgggaggagactccatagaggtggactag
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integrated database retrieval system
