Syngnathus scovelli (Gulf pipefish): 125994759
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Entry
125994759 CDS
T08785
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04137
Mitophagy - animal
sscv04141
Protein processing in endoplasmic reticulum
sscv04210
Apoptosis
sscv04217
Necroptosis
sscv04621
NOD-like receptor signaling pathway
sscv04622
RIG-I-like receptor signaling pathway
sscv04920
Adipocytokine signaling pathway
sscv05132
Salmonella infection
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125994759
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125994759
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125994759
09143 Cell growth and death
04210 Apoptosis
125994759
04217 Necroptosis
125994759
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125994759
04622 RIG-I-like receptor signaling pathway
125994759
09152 Endocrine system
04920 Adipocytokine signaling pathway
125994759
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125994759
09171 Infectious disease: bacterial
05132 Salmonella infection
125994759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125994759
04121 Ubiquitin system [BR:
sscv04121
]
125994759
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125994759
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125994759
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
125994759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-RING_4
zf-C3HC4_4
Sina_ZnF
FPP
zf-RING_6
zf-RING_5
MATH
zf_C2HC_14
Motif
Other DBs
NCBI-GeneID:
125994759
NCBI-ProteinID:
XP_049620226
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MAAQEPSPPSSLEGNKPGFPKKILANNLEDKHLCNSCLKILRRPLQAQCGHRFCSFCFNQ
IVSSGPEKCNACLKEDLFEEPTSILKQGGAFPDNAARREVEALAAVCPNEGCTWTGTIKD
FEACHEGHCDFAIILCPSCKELMRANEQERHDERECPERTLNCKYCKEPFLLKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFKAPCRFHVVGCDTSVEKEKIHEHERQCS
YEHLNLLLHFIMGIKVSLESLQPQSLEVAGHKLQELHQSLRDLELKMSQLGGGGAGASTS
ITLPSTVGATLELQLQGEKTKVFELSRRCQELELKINTFENIVCVLNREMERSCTTMEAY
NRQHRLDQDKIEILNNKVRQLERTVSLRDLSIVEMEGKMREMSAATYDGIFVWKICDFTK
KRQDAIAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLK
WPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLFCPLSKLESKNT
YIRDDTIFIKAIVDLTGL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaagagccgtctccaccatcttcgctggaaggaaacaaaccaggcttccca
aagaaaattttggccaacaacctggaggacaaacatttgtgtaattcttgcctgaaaatc
ctgcgaaggcccttacaggcgcaatgtggacaccgcttttgttcgttctgtttcaaccaa
atagtgagttctggacctgagaaatgcaatgcttgcctcaaagaagacttattcgaggaa
cccacctcgattctcaaacaaggaggcgcttttccagacaatgcagctcggagagaagtt
gaggccttggcagctgtttgccccaatgaaggatgcacatggacagggactattaaagat
tttgaggcctgccatgagggccactgtgactttgctatcatcttgtgcccttcctgcaaa
gagttgatgagagccaacgaacaggaacgtcatgatgagcgagaatgtcctgagaggaca
ctcaactgcaaatactgtaaagaaccattccttttaaagaacatcaaggctcatgatgaa
atttgcccgaagtacccaatgatctgtgaaggttgtgcaaagaaaaagatacccagagaa
aagtatgtggaccatattaagttctgcagtaaatttaaagcaccatgcagatttcatgtt
gttggctgcgatacgtctgtggagaaggagaagattcatgaacatgagcgtcaatgttcg
tacgaacaccttaacctgcttctgcatttcatcatgggcatcaaagtgagcctggagagc
ctgcagcctcagagcctggaggtagctggccacaagctacaggagctccaccagtccctg
agagatttagaactcaagatgagccagcttggtggaggtggtgctggggcttccacctcc
atcacactacccagcactgtgggtgctaccctggagctgcagctccaaggtgaaaagacc
aaggtttttgagttgagccgacgctgccaagagctggagctaaaaatcaatacgttcgag
aacatcgtttgtgtcctcaaccgagagatggaacgctcctgcaccaccatggaagcctac
aatcgacaacacagactggaccaggacaaaattgagattctcaacaacaaggttcgtcag
ctggagagaactgtgagtctgcgggacttgtccattgtagagatggaggggaagatgagg
gagatgtccgcagctacatatgatgggatcttcgtgtggaagatctgcgattttacaaag
aagagacaggacgctatcgctggacgagctcctgctatgttctctcctgccttttataca
agtaaatatggctacaagatgtgcttgcgtatctacctaaatggtgatgggacaggaagg
gggacccatttatctttgttctttgtggtgatgagaggacacagtgacgcactccttaag
tggccttttaatcagaaggtcaccctaatgctgctcgaccagaacaacagggagcacata
atcgatgctttccggcctgacatctcatcctcatccttccagaggcctgtgagtgatatg
aacattgccagtggctgcccgctcttctgtccgctctccaagctggaatctaaaaacact
tatattcgcgatgacaccatcttcatcaaggccattgtagacctcactgggctctag
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