Shewanella sediminis: Ssed_0152
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Entry
Ssed_0152 CDS
T00596
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sse
Shewanella sediminis
Pathway
sse01501
beta-Lactam resistance
sse01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ssed_0152
01503 Cationic antimicrobial peptide (CAMP) resistance
Ssed_0152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sse03036
]
Ssed_0152
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_0152
01504 Antimicrobial resistance genes [BR:
sse01504
]
Ssed_0152
Chromosome and associated proteins [BR:
sse03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Ssed_0152
Transporters [BR:
sse02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Ssed_0152
Antimicrobial resistance genes [BR:
sse01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Ssed_0152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
GPS2_interact
S-Me-THD_C
Motif
Other DBs
NCBI-ProteinID:
ABV34765
UniProt:
A8FPJ2
LinkDB
All DBs
Position
171346..172503
Genome browser
AA seq
385 aa
AA seq
DB search
MRQIVKIASVLSVALWITACGQKPEQGPQERGPMEVGVIKVEAQPQSILVELPGRSKAYL
EAEVRPQVSGIIMTRGFVEGRDVEKGQSLYQIDSSTYTAALISAKADLQSAKANLVSAKA
KALRFEKLVKLNSISEQDYDEADAAYKAALARVTVAEAAINTAKINLEYTEVRAPIAGRV
GKSSVTAGALVTANQTQTLATIQQLDPINIEIAQSSAQMLRLKSKLKQGQLKAADNAGVQ
LILEDGTTYKHDGVLQFAEVSVNEDTGSVILRAEFPNPDGVLMPGMYVRAVLNTGTDPEA
ILVPQRAITRNTKGEAVAMIIDAEGKVAARVVTTAEVIDHQWRITDGLTVGDQLIVEGLQ
KIRPGAAVKAGPLVADKKSQAQQQK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaaatagtgaaaattgcctctgttttaagtgtggcgttatggataacagcttgt
ggacaaaaacctgaacaagggccacaggaacgtgggcctatggaagtaggtgttataaaa
gtagaggcgcagcctcaatcaattttggttgagttgcctggtcgtagtaaagcttatttg
gaagcggaagttcgtcctcaagtcagcggtatcattatgactcgcggctttgtagaaggg
agagatgttgaaaaaggtcaatccttatatcagatcgattcatcgacatacactgcagca
ctgatcagtgctaaagcggatcttcaaagcgcaaaagccaacttagtctccgcgaaagca
aaagcattacgttttgaaaaattggtcaagcttaactctataagcgagcaagactatgat
gaagccgatgccgcttacaaagcagcattagcaagagttacagttgctgaagcggcgatc
aatactgcaaagattaatcttgagtacaccgaagttcgtgcacctattgccgggcgtgtg
ggcaagtcttcagtgacagccggtgcactagttactgcaaatcaaactcaaacattagcg
accattcagcaactcgatcccattaatatcgagattgcgcaatcgagtgcgcaaatgtta
cgtctgaaatctaagttaaaacagggccaactcaaggcggctgataacgcgggtgtgcag
ctcattttggaagacggtacaacatacaagcacgatggtgtgttgcagttcgctgaagtg
agtgtgaatgaggacacgggttccgttattttgcgggctgagtttcctaaccctgatggc
gtgttaatgcctggcatgtatgtgcgtgcagtgctcaataccggtaccgatccagaagcg
attttagtaccccaaagagctatcacgcgtaataccaaaggtgaagccgttgccatgatt
atcgatgctgaaggtaaggtggctgcgcgagtcgtcacgaccgctgaagtgatcgatcac
cagtggcgtattactgatggtttaactgtaggtgatcaactgattgttgaaggtctgcaa
aaaattcgccctggcgccgccgtaaaagctggaccgttagtggcggataagaaatcacaa
gcacaacaacagaagtag
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