Shewanella sediminis: Ssed_0153
Help
Entry
Ssed_0153 CDS
T00596
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18138
multidrug efflux pump
Organism
sse
Shewanella sediminis
Pathway
sse01501
beta-Lactam resistance
sse01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ssed_0153
01503 Cationic antimicrobial peptide (CAMP) resistance
Ssed_0153
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_0153
01504 Antimicrobial resistance genes [BR:
sse01504
]
Ssed_0153
Transporters [BR:
sse02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Ssed_0153
Antimicrobial resistance genes [BR:
sse01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Ssed_0153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ABV34766
UniProt:
A8FPJ3
LinkDB
All DBs
Position
172513..175665
Genome browser
AA seq
1050 aa
AA seq
DB search
MARFFIDRPIFAWVIAIIVMLAGVLSILGLPVSQYPSIAPPSVEIRAVYPGASAKTMEDS
VTQVIEQRMTGIDHLRYISSTSDSFGNATITLTFNAEADPDIAQVQVQNKLQLAMPLLPQ
EVQAQGVNVAKSSAGFLMVVGFVSQDGSLDKNDIADYVGSNVQDPMSRVPGVGTIQLFGA
QYAMRIWLDPLKLTQYNLTSQDIIASIREQNAQVSAGQLGGAPSVSGQQLNATVSAQSRL
QTAEQFKKIIIKADSTGAKVFLEDVARVELGAENYDVESYYNGKPAAGIGIQLATGANAL
ATAEGVRAKIAELQPFFPQGLEVVYPYDTTPFVEKSIEGVVHTLLEAVVLVFLIMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSAAGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
SEEGLSPIEATKKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSITIVSAMAL
SVMVAIILTPALCATMLKPIAKGHHAVDTGFFGWFNRKFDALTSRYEASVAAMIKRAGRT
MMVYLAITVAVGWIFMRMPTAFLPDEDQGILFTQAILPVNSTQEETKKVLSDVSDFYLEQ
EGDNVKSVFSVSGFSFAGNGQNMGIAFVGLKDWSERTDPGQDVQSVAGRAMGMFMQMKEA
FVFAFVPPAVIELGTANGFDFYLQDRNGQGHDKLVEARNMLLGMAAQNPNLVGVRPNGQE
DAPMYQIHIDHGKLRALSVDIDAVNSVLGTAWGGNYVNDFIDRGRVKKVYVQGEADYRMQ
PEDIDSWYVRNTKGDMVPFSAFATGSWEYGSPRLERFNGLPAMNIQGGVAPGFSTGEAMN
IIEDMVKQLPPGFGVEWNGLSYEERLSGNQAPMLYALSIVVVFLVLAALYESWSVPFSVI
LVVPLGIIGALIAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEYYEKGAGLVEA
TLHAVRVRLRPILMTSLAFGLGVVPLAISSGVGSGSQNAIGTAVLGGMMSSTFMGIFFIP
IFFVIVERIFSKREKKGAKLETKAETPAAE
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttctttatcgatcgccctatcttcgcctgggtgatcgccattattgtgatg
ctggctggggtgttatctatcctgggtctaccagtgtcgcaatatccgagtatcgcaccg
ccatcggttgagattagggctgtgtatccgggagcatcggctaaaacgatggaagattcg
gtaactcaggttatcgagcagcgaatgacagggattgaccaccttcgctacatctcatca
accagtgatagtttcggtaacgcgaccatcactttaacctttaatgccgaggccgatccg
gatattgctcaggtacaggtgcaaaacaagcttcagcttgcaatgccactgcttccgcaa
gaagttcaggctcagggtgttaacgtcgctaagtcgagtgctggcttcctgatggttgtg
ggcttcgtatctcaggatggctcactggataagaatgatatcgctgactatgtgggctct
aacgttcaagacccgatgagtcgtgtacctggtgtggggacgattcagttgttcggtgcc
cagtatgcgatgcgtatctggctcgacccactgaaactgactcaatacaacttgaccagt
caagatattatcgcttctatcagggagcaaaatgcgcaggtttctgctggacaactaggt
ggggcgccgtcggtttccggccagcagctgaacgcaacggtatcggcacagagtcgtctg
cagacggccgaacagtttaagaagatcatcatcaaggctgattcgaccggtgccaaagtg
ttcctcgaagatgttgcgcgtgtcgagttaggtgctgagaactatgatgtagagtcttac
tataatggtaagcctgctgcgggcatcggtattcagttggcgacaggtgctaacgcactt
gctacggccgaaggggttcgcgccaagattgccgaattgcagccattcttcccgcaaggg
ttagaggtggtttatccctacgatacgacgccatttgttgagaaatcgatcgaaggggtt
gtgcataccctgctcgaagctgtggtcttggttttcttgatcatgtatctgttcctgcag
aacttccgcgcaacgcttattccaacgattgcggtgccggttgtactcttaggtacgttt
gcgatcttgtcggctgccggcttctcgattaataccttaaccatgtttgccatggtactg
gccattggcctgttggtcgatgatgccatcgttgtcgtagagaacgtcgagcgagtgatg
tccgaagagggactcagtcccatcgaggccacaaagaaatcgatggatcagatcaccggg
gctcttgtgggtatcggcctgacgctttcagcggtattcgtccctatggcatttatgtcg
gggtcgacaggtgtgatctacaggcagttttcgataacgattgtgtcggcgatggcgcta
tctgtgatggttgcgatcatcctgactccagccttgtgtgccaccatgctcaagcccatt
gctaaggggcaccacgcggtagataccggcttcttcggttggtttaaccgtaagtttgat
gcattgacctcacgttatgaggcaagtgttgctgccatgatcaagcgtgcaggtcgcacc
atgatggtttatctggctattacggtcgcagtgggttggatcttcatgcgtatgccaact
gccttcctgcccgatgaagatcaggggatcttgtttactcaggctatcttgccggtgaac
tcgactcaggaagagacgaagaaagtcctgtcagatgtgtcggacttctacctggaacag
gaaggcgataacgttaaatcagtatttagcgtatcgggctttagtttcgccggtaacggt
caaaacatgggtattgccttcgtaggcttgaaagattggtccgagcgaaccgatccaggc
caagatgtacaatcggtcgctgggcgtgccatgggcatgtttatgcagatgaaagaagcc
ttcgtgtttgcctttgtaccgccggcggttatcgaactgggcaccgctaacggttttgat
ttctatctgcaggacaggaacggccaaggacacgataaactggtcgaagcacgaaatatg
ttgttaggcatggctgcacaaaaccctaaccttgtgggcgtacgtccaaatggtcaggaa
gatgcgcccatgtatcagatccatatcgatcacggcaaactcagagccttgagtgtcgat
atcgatgcggtgaacagcgtgctgggtacggcttggggcggtaattacgtcaacgacttt
atcgaccgtggtcgagtgaagaaggtctacgtccaaggagaggcggattaccgcatgcag
cctgaagatatcgactcctggtatgttcgaaacactaagggagatatggtgccattctct
gcctttgctacaggctcgtgggaatatggttcaccgcgtctggagcgtttcaacggacta
cccgcgatgaatatccaaggtggcgtagcgccaggtttcagtaccggtgaagcgatgaac
atcatcgaagatatggttaagcagttgccacctggatttggtgtcgagtggaacggtctc
tcatatgaggagcgtctatccggtaatcaggcgccaatgctatatgcactgtctattgtg
gtggtattcctggtactggcagcgctgtatgagagttggtctgtaccattctcggttatt
ttagttgtgccgttgggtattatcggtgcgttgattgcgatgaatggtcgtggtctacct
aacgacgtattcttccaggtaggtctattgactacggtaggtctcgcgacgaagaacgcc
atcttgattgtagagttcgccaaagaatactacgagaaaggtgcgggattggttgaagca
acgctgcacgcagtccgcgttcgtttgcgtccaatcttgatgacatcgcttgcatttggt
cttggtgttgtaccgctagcgattagtagcggtgtaggttcaggaagtcaaaatgctatc
ggtactgcggtattgggcggcatgatgagctcgacctttatggggatcttctttatccca
atcttcttcgtgattgttgaacgtatcttcagcaaacgtgagaagaaaggggcaaagctc
gagactaaggcggaaacaccagcagcagaatag
DBGET
integrated database retrieval system
