Shewanella sediminis: Ssed_0396
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Entry
Ssed_0396 CDS
T00596
Name
(GenBank) 3-isopropylmalate dehydratase, small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
sse
Shewanella sediminis
Pathway
sse00290
Valine, leucine and isoleucine biosynthesis
sse00660
C5-Branched dibasic acid metabolism
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01210
2-Oxocarboxylic acid metabolism
sse01230
Biosynthesis of amino acids
Module
sse_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
Ssed_0396
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
Ssed_0396
Enzymes [BR:
sse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
Ssed_0396
4.2.1.35 (R)-2-methylmalate dehydratase
Ssed_0396
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Motif
Pfam:
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
ABV35009
UniProt:
A8FQ86
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All DBs
Position
463746..464351
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AA seq
201 aa
AA seq
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MNPFTSHTGLAVMIDSANVDTDQIIPKQFLSKVTRDGFGVHLFHDWRYLDEAGDEPNPGF
SLNLPRYKGASILISKENFGCGSSREHAPWALADFGLRAIIAPSFADIFYGNSINNGLLP
VRLTDVEVQQLMDEVEASEGAEITVDLEELTVTSPSGAVFNFEIAGSARHNLLNGLDAIG
LSLACADQIARYEAQLPTWKA
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatttacttcacacactggacttgcagtgatgatcgatagtgctaacgtcgat
accgatcaaattattcctaagcagtttttatctaaggtgacccgggatggctttggggtt
cacctgtttcatgattggcgttatctcgatgaggcaggcgatgagccaaaccccggtttc
agcctcaacctgccaagatacaagggcgcctctatccttatctctaaagagaactttggt
tgtggttcgagtcgtgagcatgctccctgggcattagccgattttggattgcgagccatc
atagcaccgagttttgccgatattttttatggtaactcgatcaataatggcctgcttccg
gttcgtctgaccgatgttgaagtccagcagttgatggatgaagttgaggccagtgaaggc
gcagagatcacggtagaccttgaggaactcacggttacctctccatcgggtgcggtattt
aactttgagatagccggttcggcaaggcataacctacttaatggcctggatgctatcggt
ttgagtttggcttgtgcggatcagatagcccgctatgaggcacaattgccgacttggaaa
gcataa
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