Shewanella sediminis: Ssed_1194
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Entry
Ssed_1194 CDS
T00596
Name
(GenBank) isoleucyl-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
sse
Shewanella sediminis
Pathway
sse00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ssed_1194
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sse01007
]
Ssed_1194
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sse03016
]
Ssed_1194
Enzymes [BR:
sse01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
Ssed_1194
Amino acid related enzymes [BR:
sse01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Ssed_1194
Transfer RNA biogenesis [BR:
sse03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Ssed_1194
Prokaryotic type
Other AARSs
Ssed_1194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ABV35805
UniProt:
A8FSI2
LinkDB
All DBs
Position
1420891..1423713
Genome browser
AA seq
940 aa
AA seq
DB search
MSDYKSTLNLPETEFPMRGNLANREPVMLKSWTEDGLYQQIRDSRIGRKPFILHDGPPYA
NGSIHIGHSVNKILKDIIVKSKTLSGFDAPYIPGWDCHGLPIELKVEQKVGKPGHKVTAA
QFREKCREYAAKQVDGQREDFIRLGVFADWNKPYLTMDFDTEANIVRSLAKVIDSGHLHK
GVKPVHWCTDCGSALAEAEVEYEDKKSPAIDVAFAATDKAALLAKFDVQDCTGSASMVIW
TTTPWTLPANRALSVSPELDYVLVEFVKDGATSTVILADALVESCMERYGVESHKALGKA
KGQELELLRFNHPFYDFDVPVILGDHVTVDSGTGVVHTAPGHGQDDFVVGQKYGLEVANP
VGDNGVYKADTEIFAGQHVFKANDNVVALLEEKGALIKHEKIMHSYPHCWRHKTPIIFRA
TPQWFISMDQKGLRKQALGEIEQTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLF
VHRETEELHPDSISLMERVANRIEREGIQAWWDLDAQELLGDEAEQYRKVTDTLDVWYDS
GSSFSSVVASRPEYQGHEIDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVD
GNGRKMSKSIGNVIAPQTVTNKLGADILRLWVAATDYSGEMTVSDEILKRSADAYRRIRN
TARFLLANINGFDPVNDLVAVEEMVALDRWVVRRAAALQEELIEAYEQYNFHVVTQKLMQ
FCSVELGSFYLDIIKDRQYTAKGDSVARRSCQSALYLISEAMVRWIAPILSFTADEIWQL
LPGEREKYVFTQEWYQGLESVTLDSDLSDEYWEQLLTVRGEVNKVIEQARREKQIGGSLE
AEITLYADDALSQALATLGDELRFVLLTSKTQIVALSSAPADAIETEMTSLKLGLHKAES
EKCERCWHHREDVGQVEAHPTLCTRCVTNIEGDGEVRQFA
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactataaatctactttgaatttgccggaaacagagtttccgatgcgtggtaat
ctggctaatcgtgagccagtgatgttgaagtcctggacagaagatgggctgtatcaacag
atccgtgatagccgtattggccgtaagccttttatcttacatgatggtcctccatatgcg
aacggcagtattcatataggccattcagtcaataagatcctaaaagacattattgtaaaa
tctaagacactatctggtttcgacgcaccttacattcctggctgggattgtcatggtttg
cctatcgagctaaaggtcgagcagaaagtcggtaagccgggacataaagttacggctgca
cagtttcgtgaaaagtgtcgtgagtatgcggctaaacaggtcgatggtcagcgtgaagac
tttatccgtttaggcgtttttgccgactggaataagccttatcttacgatggacttcgat
actgaagcgaatatcgttcgttcattggcaaaagtgatcgatagcggccacttacataaa
ggtgttaagcctgttcattggtgtaccgattgtggttctgctctggcagaagccgaagtt
gaatacgaagataagaagtctccggctatcgatgtcgcttttgctgctaccgataaagct
gcgttacttgctaaattcgatgtgcaggactgtactggttcggcatctatggttatctgg
acgaccacaccgtggacattgccggcaaacagagccttgtctgtttcgcctgaacttgat
tatgttctcgttgaatttgtaaaagatggcgctacttcgacagttattcttgccgatgca
ctggtagagtcttgcatggagcgttatggagtcgagtctcataaggcgctgggaaaagct
aaagggcaagagcttgagctgttgcgttttaaccaccctttctatgattttgatgttcct
gtgatcttaggcgatcacgttaccgtcgattcgggtaccggtgtagtacacacagcccct
ggtcacggtcaggatgactttgttgtcggacagaagtacggtctggaagtggccaaccct
gtcggtgacaatggcgtgtataaggctgatacagagatatttgcaggtcagcatgtattt
aaggcaaacgataacgtcgtagcgcttcttgaagagaagggcgccttaatcaagcatgaa
aaaatcatgcatagttatccgcattgctggcgtcataagactccaatcatctttagagcc
acaccacaatggtttatctctatggatcaaaaggggctaagaaagcaagcgcttggtgag
attgagcagactcagtggatccctgattggggtcagagccgaattgaaaaaatggttgag
aatcgtccggattggtgtatctctcgccaacgtacctggggcgtacctattacactgttt
gttcaccgtgaaactgaagagttacacccggatagtatctctttgatggagcgtgttgcc
aacaggatcgaacgggaaggtattcaagcctggtgggaccttgatgctcaagagcttctt
ggtgatgaagccgaacagtaccgtaaagtgaccgacacattggacgtatggtatgactct
gggtcctctttctcgtcggttgtagcctcacgtcctgagtaccaaggtcatgagatcgat
ctttatctggaaggtagcgatcagcatcgtggctggtttatgtcttcattgatgatttcg
actgctatgaatggcaaagcaccttataagcaagtgcttactcacgggtttaccgtggat
ggcaacggccgtaagatgtcaaaatctatcggtaatgttattgcgcctcaaactgtgacg
aataagttaggtgccgatatcctgcgtttatgggtagcagcgaccgattatagcggtgag
atgacggtatctgatgagatcttaaaacgtagtgccgatgcctatcgtcgtattcgtaat
actgcacgattcctgcttgctaacatcaatggtttcgatcctgttaacgatctcgtggcc
gttgaagagatggttgctctggatcgctgggtagtgcgccgcgcagctgcactgcaagaa
gagctgattgaagcttacgagcagtataacttccacgtggtaacacagaagttaatgcag
ttctgttccgttgagctcggtagcttctatctcgatatcattaaagacagacagtacaca
gctaagggcgacagtgttgctcgtcgcagttgtcagagtgcgctttacttgatctctgaa
gctatggtgcgctggattgcgccaatcttaagtttcaccgcagatgaaatttggcagcta
ctaccgggtgagcgtgagaaatatgtcttcactcaagagtggtaccaagggcttgagtct
gtgacacttgattcagacctgagtgacgagtattgggaacagttgctaactgtccgtggc
gaagtaaataaagtcatcgaacaagctcgacgcgagaaacagattggtggttctctggaa
gctgaaattaccttatatgcggacgatgcattgtcacaagcattagcgacattaggtgat
gagctaagattcgtcctattgacctcaaaaactcagatcgttgcactatcatctgctcct
gctgacgctatcgaaaccgaaatgacatcgttaaagctgggattacataaagcagaatct
gagaagtgtgaacgttgctggcatcacagagaagacgttggtcaagtggaagcgcatcca
acgctttgtactcgttgtgtgaccaatattgaaggtgacggtgaagttcgtcagtttgct
taa
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