Shewanella sediminis: Ssed_1791
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Entry
Ssed_1791 CDS
T00596
Name
(GenBank) two component transcriptional regulator, winged helix family
KO
K07660
two-component system, OmpR family, response regulator PhoP
Organism
sse
Shewanella sediminis
Pathway
sse01503
Cationic antimicrobial peptide (CAMP) resistance
sse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ssed_1791
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Ssed_1791
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sse02022
]
Ssed_1791
01504 Antimicrobial resistance genes [BR:
sse01504
]
Ssed_1791
Two-component system [BR:
sse02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
Ssed_1791
Antimicrobial resistance genes [BR:
sse01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
Ssed_1791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
FleQ
AbiEi_1
Motif
Other DBs
NCBI-ProteinID:
ABV36402
UniProt:
A8FU79
LinkDB
All DBs
Position
complement(2159056..2159730)
Genome browser
AA seq
224 aa
AA seq
DB search
MRILVVEDDPLLSHHLKVQLSELGNQVQVALTAKEGFYQATNYPIDIAIVDLGLPDQDGI
SLIQNLRDAGLKAPVLILTARVNWQDKVEGLNAGADDYLVKPFQKEELVARLDALVRRSA
GFVKPQITSGALEVDLAAKQVSLNNEPMEVTAFEYLILEYLMRHCHEVVAKQRLLDVIYG
DKEGDPNTIEVMVSRLRKKLTKGGIENPVVTIRGQGYKFNLPCS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttggttgttgaagatgatcccctactatcccaccaccttaaagttcagctg
tcagaacttggtaaccaagtgcaggtagccctcacggccaaagagggattttatcaagca
accaattatcccatagacattgccatcgtcgatttaggccttccggatcaagatgggatt
agcttaattcaaaatttacgggatgcaggcttaaaggcaccggtattgatattaactgcc
cgagttaactggcaagataaagtcgaaggcctcaatgctggtgcagatgactacctggtg
aaacccttccagaaagaggagctggtcgccaggctcgacgctcttgtcagacgcagtgcc
ggtttcgtcaaacctcaaataaccagcggtgcgctggaagttgatctcgccgccaaacaa
gtttcattaaataacgagcccatggaagtcacggcattcgaatacttaattcttgagtac
ttaatgcgccactgccatgaggtcgttgctaagcagcgtctactcgatgttatctatggt
gataaagagggtgacccgaatactattgaggtgatggtctccaggctgaggaaaaagctc
acgaaagggggaattgaaaacccggtagtcacgattcgtggccaaggctataaatttaac
ttaccttgtagttga
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