Shewanella sediminis: Ssed_2496
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Entry
Ssed_2496 CDS
T00596
Name
(GenBank) cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
sse
Shewanella sediminis
Pathway
sse00270
Cysteine and methionine metabolism
sse00450
Selenocompound metabolism
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01230
Biosynthesis of amino acids
Module
sse_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Ssed_2496
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Ssed_2496
Enzymes [BR:
sse01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
Ssed_2496
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GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
DUF4350
Motif
Other DBs
NCBI-ProteinID:
ABV37105
UniProt:
A8FW82
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Position
3037161..3038396
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AA seq
411 aa
AA seq
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MLRWLNNNSILFGCGQYLMKKETQIISTGRDKKWTKGVINPPVFRASTMVFDTMDEMRFA
IKNRANGEMFYGRRGGPTHFAFQAAIAELEGGVGTALYPSGSAAISGALLSFLKAGDHLL
MVDSAYEPTRDLCNKLLAGFGIETTYYDPMIGAGISELIRPNTKVLFLESPGSITMEVQD
VPTLSEIAHKHDIVVMLDNTWASPINSRPFDMGVDISIQAATKYIVGHSDVMMGTATSNE
AHWDQLRENSYLMGQCTSPDDVYLANRGLRTLGVRMQQHEQNALKVANWLATRPEVDHIR
HPAFDTCPGHQFFKRDFSASNGLFSFVLKEGDLNSVTALVENMHHFKMGFSWGGFESLIL
GVFGIDKLRTATKWDSSKPLIRLHIGLENPDDLIADLEAGFERFNAALNKR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgttaagatggctaaacaacaattcaatcctcttcggttgtggacagtaccttatgaaa
aaagagacacagataatcagtaccggtcgagataaaaaatggaccaaaggcgtcattaat
cctcctgtatttcgagcttcgaccatggttttcgacactatggatgagatgcgtttcgcc
atcaagaaccgggccaatggagagatgttctatggcagacgcggcgggccgacccacttt
gcttttcaggccgccatcgccgaacttgagggtggtgtagggaccgcactatatccgtcg
ggatcggccgccatcagcggtgccctgctctcatttttaaaagccggcgatcacctgcta
atggtcgatagcgcctatgaacccacccgggatctgtgcaataaattgcttgcggggttc
ggtatcgagaccacctactacgatcctatgattggtgccggcattagcgaactcatcagg
ccaaacactaaggtgttgtttctcgaatctccaggctccatcaccatggaagttcaggat
gtacccacactgagtgaaattgctcacaagcacgatatcgtcgtcatgctggataacacc
tgggcttcccccattaactcgcgacccttcgacatgggcgtcgatatctcaattcaggcc
gccactaaatatattgtcggacattcggatgtcatgatgggtaccgcgacatccaatgaa
gctcactgggatcaactgagagaaaatagttacctgatggggcaatgcacctcacccgat
gatgtctacctggctaatcggggtctgagaacattaggtgtgcgtatgcagcaacatgag
cagaatgcgcttaaagttgccaactggttagccactcgtcccgaggtcgatcatataagg
catccggcattcgacacctgtcccggccatcagttttttaaacgcgatttcagcgcctcg
aatggcctgttctcctttgtgctcaaagagggcgacctgaactcagtcactgcactggtc
gaaaatatgcaccacttcaagatgggcttctcctggggtggatttgagagcctgatctta
ggggtatttggcatcgataagttaagaaccgccaccaaatgggatagcagtaaacctctg
atacgtctgcatatcgggctggaaaaccccgacgatcttattgccgatctggaagcagga
ttcgagcggttcaatgccgctctcaataagcgatag
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